Massilia sp. NR 4-1: ACZ75_02850
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Entry
ACZ75_02850 CDS
T04026
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mnr
Massilia sp. NR 4-1
Pathway
mnr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACZ75_02850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnr03400
]
ACZ75_02850
Enzymes [BR:
mnr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACZ75_02850
DNA repair and recombination proteins [BR:
mnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACZ75_02850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKU20607
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All DBs
Position
685268..688681
Genome browser
AA seq
1137 aa
AA seq
DB search
MHASVTPGLLILHGNQLEQLRAAVFQWLRAHPLAPLETETFLVQSNGVAEWLKIALAEDA
GVCAATRVALPARFLWETYRGMLGRERVPPISAFDKAPLTWRLMRLLPVLLADPVFAPLR
HFLGDGDPERRLQLAERLADLFDQYQVYRADWLEDWAAGRDQLRSARGELAPLAEDQRWQ
GALWRAVIASVPEHERELGRASVHTEFLRAVASGAQPLGRLPRRIVLFGVSALPFQTLQA
LAALARFTQVMLAVPNPCQFYWGDIIEGRDLLRAAHRRQSLRNGVDLGQIPLEELHAHSH
PLLAGWGRQGRDFIRMLDEFDSAAAAEGRSDSLRVDLFSEGEGATLLAQVQAAVRDLLPL
SEHPQAPPPDSDRSIEFHVAHSVQREVEVLHDQLLAMFAASEEEGGPALRPRDVVVMVPD
IDVFTAAIHAVFGQHKRSDARYIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQSEVRD
LLDVPALAARFGLAADDLPTLGLWIEGAGVRWGLDRQHREGLGLGPAGEQNAWIFGVRRM
LLGYASGHGAAFNGIEPYGEVGGLDAALAGSLAQLVEALLHWRALLAQPRTPEQWGVQAR
ALLAAFFKASDEGDRLMLAQLDETLNRWLETSAGAGFEEAVPLAVLREAWLGALDEPSLE
HQFVSGGVTFCTLMPMRAVPFRVACLLGMNDGDFPRRANKADFDLLALPGMARPGDRSRR
DDDRYLMLEAVLAARDKLYISWVGRNVRDNSEQPPSVLLSQLFDYLKAGWQLDLGARTTE
HALQPFSRRYFEAGGLLTYAGEWRAAHAAGEAQALEAEGQLPPFEIDDSFRLKLNSLASF
IRQPVKYFFRQRLGVVFGESALVGEDEEPFSLNALERYLLEDTMLDDGGAEEDVADVRSG
LEQRAARLRREGVLPIGLIGEQWQEQLVDALEPVRYAWLALRARYPLAASKLPVKLELAG
LVLEDWVDQLRHDGSTTVWLAQISSKACDKDGWPRGEKLIPMWLRQLAAAAQGMPVTGFL
VARDAIVTMAPLDPAQSRDQLAALAALWRAGMDAPLPTACKTALALVREGDPRAVYDGGF
EVMGENEDLCLARLWPDFAALAAVPEFADCSRELYGPLADWLQHAVTVDPMKEEGGA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgagcgttactcccggacttctgatcttgcacggcaatcagctggagcagttg
cgcgccgccgtgttccagtggttgcgcgcgcatccgctggcgccgctggagaccgagacc
ttcctggtgcaatcgaacggcgtggccgaatggctcaagatcgcgctggccgaggatgcg
ggcgtgtgcgccgccacccgcgtggccttgccggcccgcttcctgtgggagacctatcgc
ggcatgctggggcgcgagcgggtgccgcccatttccgccttcgacaaggcgccgctgacc
tggcgcctgatgcgcctgttgccggtgctgctggccgatcccgtctttgcgccgctgcgc
catttcctcggcgacggcgacccggaacgccgcctgcaactggccgagcgcctggccgac
ttgttcgaccagtaccaggtctaccgcgccgactggctggaagactgggccgccgggcgc
gaccagttgcgcagcgcgcgcggcgaactggcgccgctggccgaggaccagcgctggcag
ggcgccttgtggcgcgccgtgatcgccagcgtgccggaacacgagcgtgagctgggccgc
gcttccgtgcacaccgaattcctgcgcgccgtcgccagtggagcgcagccgctgggccgc
ctgccgcgccgcatcgtgctgttcggcgtctcagccctgccgttccagaccttgcaggcg
ctggcggcgctggcccgtttcacccaggtgatgctggccgtgcccaatccctgccagttc
tactggggcgacatcatcgaaggacgcgacctgctgcgcgccgcccaccgccgccaaagc
ctgcgcaatggcgtcgacctgggccagattccgctggaagaactgcatgcccacagccat
ccgctgctggcgggctgggggcgccagggccgcgacttcatccgcatgctggacgaattc
gacagcgccgccgcggccgaaggacgcagcgacagcctgcgcgtggacctgttcagcgaa
ggcgagggcgccaccctgctggcccaggtccaggcggccgtgcgcgacctgctgccgctg
tccgagcacccgcaggcgccgccgccggacagcgaccgctccatcgaattccatgtggcg
catagcgtgcagcgcgaagtcgaagtgctgcacgaccagctgctcgccatgtttgccgcc
tcggaggaggaaggcggcccggcgctgcggccgcgcgacgtggtggtgatggtgccggac
atcgacgtgttcaccgccgccatccacgccgtcttcggccagcacaaacgcagcgatgcg
cgctatatcccgtttgaaatcggcgacgtcaacgaccgcagcgtgaatccgttgctggtg
gcgctggaatggctgctgcgcctgccgcagcagcgctgccgccagagcgaggtgcgcgac
ctgctggacgtgccggcgctggcggcgcgcttcggcctggcggccgacgatctgccgacg
ctgggtctgtggatcgagggcgccggcgtgcgctggggcctggaccgccagcaccgcgaa
ggcctgggcctggggccggccggcgagcagaatgcctggattttcggcgtgcgccgcatg
ctgctgggctatgccagcggccatggcgcggccttcaacggcatcgagccgtatggtgaa
gtgggtgggctggatgcggcgctggccggctcgctggcccaactggtcgaagccctgctg
cactggcgcgcgctgctggcccagccgcgcacgccggaacagtggggcgtgcaggcgcgt
gccctgctggcggccttcttcaaggccagcgacgaaggcgaccgcctgatgctggcgcag
ctggacgaaaccctgaaccgctggctggaaaccagcgccggcgccggcttcgaggaagcc
gtgccgctggccgtgctgcgcgaagcctggctgggcgcgctggacgagccgtcgctggaa
caccagttcgtctccggcggcgtgaccttctgcaccctgatgccgatgcgcgccgtgccc
ttccgcgtggcctgcctgctgggcatgaacgatggcgacttcccgcgccgcgccaacaag
gccgacttcgacctgctggccttgcccggcatggcgcgtcccggcgaccgctcgcggcgc
gacgacgaccgctacctgatgctggaagccgtcctggccgcgcgcgacaagctgtatatc
agctgggtggggcgcaatgtgcgcgacaacagcgaacagccgccgtcggtgctgctgtcc
cagctcttcgactacctgaaggcgggctggcagctggacctgggcgcgcgcaccaccgaa
cacgccttgcagcccttcagccgccgctatttcgaggccggcggcctgctcacctatgcc
ggcgaatggcgcgccgcccacgcggccggcgaggcgcaggcgctggaagcggaggggcag
ttgccgcctttcgaaatcgacgacagcttccgcctcaagctgaacagcctggccagcttc
atccgccagccggtcaaatacttcttccgccagcgtttgggcgtggtgttcggcgaatcg
gccctggtgggcgaggacgaggaaccgttctcgctgaatgcgctggagcgctatctgctg
gaagacaccatgctcgatgacggcggcgccgaggaagacgtcgccgacgtgcgcagcggc
ctggaacagcgcgccgcgcggctccggcgcgagggcgtgctgccgatcggcctgatcggc
gagcagtggcaggagcaattggtcgatgcgctggaaccggtgcgctacgcctggctggcg
ctgcgcgcgcgctatccgctggccgcgtccaaattgccggtcaagctggaactggccggc
ctggtgctggaggactgggtcgaccagctgcgccacgacggttccaccaccgtatggctg
gcgcagatctcgtccaaggcctgcgacaaggatggctggccgcgcggtgaaaagctgatt
cccatgtggttgcgccagctggccgccgccgcgcaaggcatgccggtcaccggcttcctg
gtggcgcgcgacgccatcgtcaccatggccccgctcgacccggcccagtcgcgcgatcaa
ctggcggcgctggccgcgctgtggcgcgccgggatggatgcgcccctgcccacggcctgc
aagacggcgctggcgctggtgcgggaaggcgatccgcgcgccgtgtacgacggcggtttc
gaggtgatgggcgagaatgaggatctctgcctggcgcgcttgtggcccgatttcgcggcc
ctggcggcggtgccggaattcgccgactgctcgcgcgagctgtatggcccgctggccgac
tggctgcagcatgcggtgacggtcgatcccatgaaagaggagggcggggcatga
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