KEGG   Massilia sp. NR 4-1: ACZ75_13365
Entry
ACZ75_13365       CDS       T04026                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
mnr  Massilia sp. NR 4-1
Brite
KEGG Orthology (KO) [BR:mnr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mnr03032]
    ACZ75_13365
   03036 Chromosome and associated proteins [BR:mnr03036]
    ACZ75_13365
   03400 DNA repair and recombination proteins [BR:mnr03400]
    ACZ75_13365
DNA replication proteins [BR:mnr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ACZ75_13365
Chromosome and associated proteins [BR:mnr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ACZ75_13365
DNA repair and recombination proteins [BR:mnr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ACZ75_13365
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2530 HU-CCDC81_euk_1 HU-DNA_bdg
Other DBs
NCBI-ProteinID: AKU22306
UniProt: A0A0K1JZ99
LinkDB
Position
3301127..3301414
AA seq 95 aa
MKKGELIAEFAKRTEMSGAAANDAVNTLIAIVTERLKKGDTVGITGFGTFSVAKRAARKG
RNPATGEAIKIAASKTPKFSAGATLKAAVNPTKKK
NT seq 288 nt   +upstreamnt  +downstreamnt
atgaaaaaaggcgaactgattgcagaatttgcgaaacgtaccgagatgtccggtgccgcc
gccaatgacgcagtgaacactctgattgccatcgttaccgagcgtctgaaaaaaggcgat
acggtcggcatcaccggcttcggcaccttctccgtcgccaaacgcgctgctcgcaaaggc
cgcaatcctgcaaccggcgaagcgatcaaaatcgccgcgtccaagaccccaaaattctcg
gctggcgctaccctgaaagcggcagtgaacccaaccaagaagaagtaa

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