Massilia sp. NR 4-1: ACZ75_23815
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Entry
ACZ75_23815 CDS
T04026
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mnr
Massilia sp. NR 4-1
Pathway
mnr03030
DNA replication
mnr03430
Mismatch repair
mnr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACZ75_23815 (dnaE)
03430 Mismatch repair
ACZ75_23815 (dnaE)
03440 Homologous recombination
ACZ75_23815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnr03032
]
ACZ75_23815 (dnaE)
03400 DNA repair and recombination proteins [BR:
mnr03400
]
ACZ75_23815 (dnaE)
Enzymes [BR:
mnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACZ75_23815 (dnaE)
DNA replication proteins [BR:
mnr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACZ75_23815 (dnaE)
DNA repair and recombination proteins [BR:
mnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACZ75_23815 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RMI2
Mrr_cat
Motif
Other DBs
NCBI-ProteinID:
AKU24028
LinkDB
All DBs
Position
5658604..5662158
Genome browser
AA seq
1184 aa
AA seq
DB search
MNMATIEQEGGAAVVEAAAPTGPDFVHLRVHSEYSIVDGLVRIDDLVKSAAKDKQAALAV
TDLANLFCMVRFYKAARGKGIKPVVGVDAWITNDDNRDKPSRLLLLAKNRMGYLQLCELL
STAWLTNQYKGRAEIRLEWLQALATNSYELLPGESGAGGLIALSGAQFGDIGMAIDNGNL
ELAERQAQKWAAIFPGHFYVEIQRAGQPNQEAQVRHSVALASKLGLPVVATHPVQFLSEQ
EFIAHEARICIAEGEMMANAKRVKRFNEQMRFLSQAEMRELFADLPGALQNSVEIAKRCN
LTLTLGKPQLPNFPTPPGVTIDEYLVSESKAGLEKRLEHLFPDPVVREAKRPRYEERLKF
ETDTICKMKFPGYFLIVAEFIQWAKENGVPVGPGRGSGAGSLVAYCLLITDLDPLQYNLL
FERFLNPERVSMPDFDIDFCQEGRDRVIQHVKDLYGKEAVSQIATFGTMAAKGAIRDVGR
VLDFGYTFCDGVSKLIPFKPGKPVTIAEAIEEEPMLKERLEGEEEVRQLLDLAQQVEGIT
RNIGMHAGGVLIAPGKLTDFCPLYTQGGDGGVVSQYDKDDVEAVGLVKFDFLGLTTLTIL
DRAVGYIRDLDPAMADFDLAKVTLTDRASYELLTKAKTVAVFQLESRGMQGMLKDARPDR
FEDIIALVALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQ
IIGGYSLGGADMLRRAMGKKKAEEMAEHRQIFREGAAKGGLTTEKADEIFDLMEKFAGYG
FNKSHAAAYALLSYHTAYLKQHHTAAFMAANMSLAMDDTDKVKILVEDSIEVCGLTMLPP
DINLSDYRFRPDGPPPSVTGKKVTQIRYGLGAVKGSGQNAIEAVIAARESGGPFTSLFDF
CKRVDKKQINRRTIEALIRSGAFDSFGVDRAVLFASVSFAMECADQDAKAANQVSLFGGE
DSDLVAPPEYVKAQPWSDRQKLAEEKLALGFYLSGHMFDSFAGEARRFARTKLSELEPSR
EPRMLCGVITGIRPQMTQRGKLLIVTLDDKSGVVEVTVYNEVFEPNKRMFKEDEFLAVVG
KVSEDRFSGGLRISAEKVFDIVTARVQYGRQLGMALPATLDSKKIAEVLAPHRNPAGLPV
AARIQPQGVSCVLQLGEEWRVAPSDELNLALQQQLGASDVAIEY
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggcaacaatcgaacaagaaggcggcgcggccgtggtggaagcggcggcccca
actggcccggatttcgtccacctgcgggtgcactcggagtattcgattgttgacggcctg
gtgcgcatcgacgacctggtcaagtccgccgccaaggacaagcaggcggcgctggccgtg
accgacctggccaatctgttctgcatggtgcgcttctacaaggcggcgcgcggcaagggc
atcaagccggtggtgggggtggacgcctggatcaccaacgacgataaccgcgacaagcct
tcgcgcctgctgctgctggcgaagaaccgcatgggttatctgcagctgtgcgagctgctg
tcgaccgcctggctgaccaaccagtacaagggccgcgccgaaatccgcctggagtggctg
caggcgctggccaccaatagctatgagctgctgcccggcgagagcggggcgggcggcctg
atcgccctgtccggcgcccagttcggcgatatcggcatggccatcgacaacggcaacctg
gagctggccgagcgccaggcgcagaaatgggccgccatcttccccggccatttctatgtc
gagatccagcgcgccggccagcccaaccaggaagcccaggtgcgccattcggtggcgctg
gcctcgaaactgggcctgccggtggtagcgacccatccggtgcagttcctgtccgaacaa
gaattcatcgcccacgaggcccgcatctgcatcgccgaaggcgagatgatggccaacgcc
aagcgcgtcaagcgcttcaacgagcagatgcgtttcctgtcccaggccgagatgcgcgag
ctgttcgccgacttgccgggcgccctgcaaaactcggtggaaatcgccaagcgctgcaac
ctcacgctgacgctgggcaagccgcagctgccgaacttcccgacgccgccgggcgtgacc
atcgacgagtacctggtctccgaatcgaaggccggcctggaaaaacgcctggaacacctg
ttccccgatcccgtggtgcgcgaagccaagcgtccgcgctatgaggagcgcctgaagttc
gagaccgataccatctgcaagatgaagttccccggctacttcctgatcgtggccgagttt
atccagtgggccaaggagaatggcgtgccggtggggccgggccggggttcgggcgccggt
tcgctggtggcgtactgcctcttgatcaccgacctcgatccgctgcaatacaatctgctg
ttcgagcgtttcctgaatcccgagcgggtctccatgcccgacttcgatatcgacttctgc
caggaagggcgcgaccgcgtcatccagcacgtcaaggacttgtacggcaaggaggcggtc
tcgcagatcgccaccttcggtaccatggcggccaagggcgcgatccgcgacgtgggccgc
gtgctggacttcggctacaccttctgcgacggcgtttccaagctgattcccttcaagccg
ggcaagccggtgacgatcgccgaggcgatcgaggaagagccgatgctgaaagagcgcctg
gagggcgaggaggaagtgcgccagctgctcgacctggcgcagcaggtggaaggcatcacc
cggaatatcggcatgcacgccggcggcgtgctgatcgcccccggcaagctgaccgacttc
tgtccgctgtacacccagggcggcgacggcggcgtggtgtcgcaatacgataaggacgat
gtggaggccgtcggcctggtgaagttcgacttcctgggcttgaccacgctgaccatcctc
gaccgcgcggtgggctatatccgcgacctcgatccggccatggccgactttgacctggcc
aaggtaacgctgaccgaccgcgcttcctacgagctgctgaccaaggccaagacggttgct
gtcttccagctggagtcacgcggcatgcagggcatgctgaaagatgcgcgtcccgaccgt
ttcgaggacattatcgcgctggtggccttgtaccgtcccggcccgatggacctgattccc
gacttctgcaagcgcaagcacggcgagaagttcgactatcccgatccgcgcaccgaaggc
atcctgtccgaaacctacggcatcatggtgtaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgctgggcggcgccgacatgctgcgccgcgccatgggcaagaag
aaggccgaggaaatggccgagcaccgccagatcttccgcgagggcgcggccaagggcggc
ctgaccacggaaaaggccgacgagatcttcgacttgatggagaagttcgcgggctacggc
ttcaataaatcgcacgccgccgcttacgcgctgctgtcctaccataccgcttacctgaag
cagcaccataccgccgccttcatggcagccaatatgtcgctggccatggacgacaccgac
aaggtgaaaatcctggtcgaggattcgatcgaggtgtgcggcctgaccatgctgccgccc
gatatcaacctgtccgactaccgcttccgtcccgacggcccgccgccttcggtcacgggc
aagaaggtgacgcagatccgctacggcctcggcgcggtgaagggctcgggccagaacgcc
atcgaggcggtgattgccgcgcgcgagtcgggcggcccgttcaccagcttgttcgacttc
tgcaagcgggtcgacaagaaacagatcaaccgccgcaccatcgaagccctgatccgcagc
ggcgccttcgacagcttcggcgtcgaccgcgccgtgctgtttgcctcggtcagcttcgcc
atggaatgcgccgaccaggacgccaaagcggccaaccaggtcagcctgttcggcggcgag
gacagcgacctggtggccccgcccgaatacgtcaaggcccagccctggagcgaccgccag
aagctggccgaagagaagctggcgctgggcttctacctgtccggccatatgttcgattcc
ttcgccggcgaggcgcgccgctttgcgcgcaccaagctgtcggagctggagccgtcgcgc
gagccgcgcatgctgtgcggcgtgatcaccggcatccgtccccagatgacccagcgcggc
aagctgctgatcgtcacgctggacgacaagagcggcgtggtcgaagtcaccgtctacaac
gaggtgttcgaaccgaacaagcgcatgttcaaggaagacgaattcctggccgtggtgggc
aaggtgtcggaagaccgcttctcgggcggcctgcgcatctcggccgagaaggtgttcgac
atcgtcacggcgcgcgtgcagtatggccgccagctcggcatggccctgccggccaccctg
gacagcaagaagatcgccgaggtgctggcgccgcaccgcaatccggccggcctgccggtg
gccgcgcgcatccagccgcagggcgtgagctgcgtgctgcagctgggcgaggaatggcgc
gtggcgccgtccgacgagttgaacctggcgctgcagcagcagctcggcgcctccgacgtg
gccatcgagtactaa
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