Massilia sp. NR 4-1: ACZ75_25890
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Entry
ACZ75_25890 CDS
T04026
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mnr
Massilia sp. NR 4-1
Pathway
mnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACZ75_25890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnr03019
]
ACZ75_25890
03400 DNA repair and recombination proteins [BR:
mnr03400
]
ACZ75_25890
Enzymes [BR:
mnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACZ75_25890
Messenger RNA biogenesis [BR:
mnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACZ75_25890
DNA repair and recombination proteins [BR:
mnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACZ75_25890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKU25164
UniProt:
A0A0K1K748
LinkDB
All DBs
Position
6137613..6139142
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AA seq
509 aa
AA seq
DB search
MPQPAPRLAAQQRRQIQHLLHQVFGLERLRPGQQAVLDNVLAGRDTLALMPTGSGKSLCY
QLPAAMLDGTVVVVSPLIALMQDQADKLQDTGLDAAQLNSSLARAEEAAALDSIRGRRSD
IVFCTPERLATPEFLQLLRHTPIALLVVDEAHCISQWGHDFRPAYLEIGAARAALGRPPV
LALTATATDEVVADIARQLDAPGLHVVNTGIYRANLHYRVIQSTNPREKLALALEIVRET
AGAGIVYAATVKAAEEVHALLREAGESVACYHGKLRAAERRQNQQAFMDGACRVLVATNA
FGMGIDKPDIRFVLHVQIPATLEAYYQESGRAGRDGAAAACTLLYLHEDKRVQQYFLARA
YPSAAELRQVHEAVLAQPAGRLADLKAALPGMGDLRLKVCLKLLKDGQLLRQNRQLSYMA
GKAAATAALFGALAAGYEQKQERDRAALEQMVGYAQSGYCRWKLLLDYFGDETAGVERCG
VCDNCLAPPQVQPLPGEREERMPASAAVL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcagccggcgccgcgccttgcggcccagcagcgccgccagatccagcacctgctg
caccaggtgttcggtctggaacgcctgcgccccggccagcaggctgtgctcgacaatgtg
ctggcgggccgcgacaccctggccctgatgcccaccggcagcggcaagtcgctgtgctac
cagctgccggccgcgatgctggacgggacggtggtggtggtttcgccgctgatcgcgctg
atgcaggaccaggcggataaattgcaggacacggggctggatgcggcgcagctcaacagc
agcctggcgcgcgccgaggaagcggcggcgctcgacagcatccgcggccggcgcagcgac
atcgtgttctgcacgccggagcggctggccacgccggaattcctgcagctcttgcggcat
acgccaatcgccctgctggtggtggacgaagcgcattgcatctcgcaatggggccatgat
ttccgccccgcttatctggagatcggcgcggcgcgcgccgccctgggacgcccgccggtg
ctggccctgacggccaccgccaccgatgaggtggtggccgatatcgcgcgccagctcgac
gcgcccggcctgcatgtcgtcaacaccggcatttaccgcgccaatctgcattaccgcgtg
atccagagcaccaatccgcgcgagaagctggcattggcgctggaaatcgtgcgcgaaacg
gcgggcgcgggcatcgtctatgccgccaccgtcaaggcggccgaggaagtccatgccttg
ctgcgcgaagccggggaaagcgtggcctgctaccacggcaagctgcgggccgccgagcgc
cgccagaaccagcaggccttcatggacggcgcatgccgcgtgctggtggcgaccaacgct
ttcggcatgggcatcgacaagcccgatatccggtttgtactgcatgtgcagatcccggcc
acgctggaagcctattaccaggaatcgggccgcgccggacgcgatggcgcggcggccgcc
tgcacgctgctgtatctgcatgaggacaaacgcgtgcagcagtatttcctggcgcgcgcg
tatccctcggcggcggaattgcgccaggtgcatgaggcagtgttggcgcagccggccggg
cgtctggccgatctgaaagcggccttgccggggatgggcgacctgcgtctcaaggtctgc
ctcaagctgctcaaggacggacaactgctgcggcagaaccgccagctcagctatatggcc
gggaaggccgccgcgaccgccgcgctgttcggtgcgctggccgccggctatgagcaaaaa
caggagcgcgaccgcgccgcgctggaacaaatggtaggctatgcgcaaagcggctattgc
cgctggaagctgctgctcgattattttggcgacgagacggccggcgtcgaacgctgcggc
gtgtgcgacaactgcctcgcgccgccgcaggtgcagcccttgccgggcgaacgggaagag
cgtatgccggcatcggccgccgttctttaa
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