Moraxella nasovis: LU293_06600
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Entry
LU293_06600 CDS
T08442
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mns
Moraxella nasovis
Pathway
mns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU293_06600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mns03019
]
LU293_06600
03009 Ribosome biogenesis [BR:
mns03009
]
LU293_06600
Enzymes [BR:
mns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LU293_06600
Messenger RNA biogenesis [BR:
mns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LU293_06600
Ribosome biogenesis [BR:
mns03009
]
Prokaryotic type
rRNA processing factors
LU293_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UNU72776
LinkDB
All DBs
Position
complement(1352305..1355811)
Genome browser
AA seq
1168 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDNHLYDFDLENRTREQKKANIYKGRITRVEPSLEAAFVEY
GSLRQGFLPLREIAPEYLHGNLREESIKQLLKEGDEIIVQVEKEERGNKGAALSTYISLA
GRYLVLMPNNAKGGGISRQISGKVREEMKQIIASLDIPKHMSIIVRTAGLGKGFEDLQND
LNHLLDIWSSIQTQNKTRPSPCLVHQEAGVVTRAVRDYLRDDIGEIWIDSENAYNEAANF
IAAVMPTQLDKLRKYTDYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEALVSIDI
NSSKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMADARHQKEVEKRLI
EATRHDRARVQFAEISKFGLMQMSRQRLRPSLEEATGYICPRCHGNGMIRDLRSLSLSIM
RQIEQIALKERSGEIQAEVPTEIAAFLLNEKRESLVYLEQDSGARVTILPHAHLESPNFS
LHFNPDGFAPSSYERIVNAEEEEMGDRGYDVNWQTQQAESTNAKNNRWQDQSSAKPNEKK
SATTKTEETQAKPAGHTPQAVAWLSNLFAPKPQAKLADSLNSADAALAIESLVNSGNVSL
GAAGQIAIPTKTNTAPQNERGQYTERDDNERKPRHKKPKKETLKDESNPIKERQDNHKKK
EEKREYPKREVGSRRESRGEVVREPSLTLDVPNAVEKSTKKESQERPQKAVNSTDIVLHI
TPIIKEKLATEVVHVCLDGDKSTKKAPSKTKTDYTTSNKATHAQGNAQQDADHTPSAKEE
IQPNEKDVTVAPSIPDVSEKQAIDDTAPSHDAHTSTPSSQADKPKLAVPAVATWSKADDA
TKAKLAALAKQTGRAINDPRVVRSLSSAVADITGTAGDFIERTLGTSADGDFIHRFIAAV
VKARSGEAVDFSNYGYASLGETYLTEYAQQITAKSKTSVLQGKTAVTPSPIGRRASNDPR
GQHPDFYKSDTSSTADQATPADKPIADDADTYNALTGGEAALAVSEQSEALLHQVDVIDD
SHKQEEPKADATQPDESQDANAITAIEEIKQADKTDGDEQTDTPAKSGDDTQVAVIDDKT
PKVKPTPKAKVSVSRNAKKGKVKTNSYKDMIENVAGQLLPQVGILTLAQPKSKVRAKKTS
KAAQKSEVRKAGAKINKPETPSDTDTNG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattttaatcaacgccacacacaacgaagagattcgtgtggcactttgtaaa
gacaatcacctatacgattttgacctagaaaatcgcactcgtgaacaaaaaaaagccaac
atctacaaaggtcgtatcacccgtgttgagccatcattagaagcagcttttgtggaatat
ggctctctcagacaaggctttttgcctttacgtgagattgcccctgaatatctacacggc
aacctgcgtgaagagagcatcaaacagcttctaaaagaaggtgatgaaatcatcgttcaa
gtagaaaaagaagagcgtggcaacaaaggggctgccctatctacttacatctcactggct
ggtcgctatttggtactcatgccaaataatgcaaaaggcggtggtatcagccgtcaaatc
tcaggcaaagtgcgtgaagagatgaagcaaatcatcgcaagcttagacattcctaagcac
atgagtatcatcgtgcgtaccgctgggcttggcaaaggttttgaagacctgcaaaacgac
cttaaccacctacttgacatctggtcatctatccaaacccaaaacaaaactcgcccaagc
ccttgtcttgtacaccaagaggctggcgtggtaactcgtgcggtgcgtgattatctgcgt
gatgacattggcgagatttggattgacagcgaaaatgcctacaatgaagctgccaatttc
atcgccgccgtcatgccaactcagcttgacaaactgcgtaaatacacagactacgaaccg
atgtttgcacgttttggcattgagcgtcaaattgaaactgcctatcagcgtgaagtacgc
ctgccatcaggcggttcaatcgtcattgaccaaaccgaggcactggtatctattgacatc
aactcatcaaaatccaccaaaggctctgatgttgccgagaccgcctatcacaccaaccta
gaagctgccgatgagattgcccgccaactgcgtctaagagacatgggcggtctgattgtc
attgattttattgacatggcagacgcacgccaccaaaaagaagtagaaaaacgcctaatt
gaagcgacacgccacgaccgtgctcgggtacaatttgctgaaatctccaagtttggacta
atgcaaatgagccgtcaaagactgcgtcctagcctagaagaagccacaggctacatctgc
ccacgctgtcatggcaatggtatgattcgagatttgcggtctttatcgctatcaatcatg
cgtcaaatagagcaaatcgccctaaaagaacgttcgggcgaaatccaagcagaagtgccg
actgaaattgcagccttcttattgaatgaaaaacgtgaaagcctagtctacctagaacaa
gacagcggtgcacgtgttaccatcttgccgcacgctcatcttgaaagcccaaattttagc
ctgcattttaatccagatggctttgccccatctagctatgaacgcatcgtcaatgccgaa
gaagaagagatgggcgaccgtggctatgatgtgaattggcaaacccaacaagctgaatct
accaacgccaaaaataaccgctggcaagatcaatcttctgctaagccaaacgagaaaaaa
tctgcgacaacaaaaacagaagaaacccaagccaaaccagcaggacacacccctcaagca
gtagcatggttgtctaatttatttgctccaaaaccacaagcaaagcttgcagacagcctt
aacagtgcagatgctgctcttgcgattgagtcacttgtaaactctggtaatgtcagctta
ggagcggcaggtcaaattgccatccccaccaagaccaacacagctccacaaaatgaacgg
ggacagtacaccgaacgtgatgacaacgaacgcaagcctcgccataaaaagccaaaaaaa
gaaacactaaaagatgaaagcaatcccatcaaagaacgtcaagataatcacaagaaaaaa
gaagaaaaacgtgaatatccaaaacgtgaggtaggcagtcgtcgtgaatctcgaggcgaa
gtagttcgcgagccatcactaacgcttgatgtaccaaacgctgtcgaaaaaagcaccaaa
aaagagtcacaagagcgtccacaaaaggcagtaaacagcactgatatcgtcttacatatc
actccgattataaaagaaaagctagcgactgaagtggtacatgtctgcttagatggtgat
aaatccaccaaaaaagcaccatcaaaaactaagacagattacacaacgagcaacaaggca
acacacgctcaaggcaacgctcaacaagacgctgatcacacaccttctgccaaagaagaa
attcagccaaacgaaaaagatgttactgtcgcaccatcaatcccagatgtatccgaaaaa
caggcgattgatgatactgcaccaagtcatgatgctcacacatcaacaccaagcagtcaa
gcagataagcctaaattggcagtgccagcagtagccacttggtcaaaggccgatgatgct
accaaagcaaagcttgcagctcttgccaagcagactggcagagcgattaacgacccaaga
gtggttcgctcgctaagcagtgctgtggcagacattacaggcacggcaggcgacttcatt
gaacgcacacttggtacgtctgctgacggtgattttattcatcgctttattgcagcagtt
gtgaaagctcgtagcggtgaagcagttgattttagtaactatggctatgcctcgcttggt
gaaacttacctaacagagtatgcacagcagattaccgctaaatcaaagacgtctgttctg
caaggtaagacggcagttacgccaagtccgattggtcgccgtgcatcaaatgaccctcgt
ggtcagcatcctgatttttataaatcagatacgtctagtaccgccgatcaagctacgcca
gcagacaagcctatcgctgatgacgctgacacatacaatgctctaactgggggtgaggct
gctttagcagtcagcgaacaaagcgaagctttgcttcatcaggtagatgtgatcgacgac
agtcacaaacaagaagagccaaaagcggatgctactcagcctgacgaatctcaagatgct
aatgcaataacagcaatagaggagattaaacaagctgataaaaccgatggcgatgagcag
actgatacacctgcaaaaagtggagatgatacccaagtcgctgtcattgatgacaaaact
cctaaagtaaaacccaccccaaaagcaaaggttagtgtctcacgcaatgccaaaaaaggc
aaggtcaagaccaacagctataaagacatgattgaaaatgtcgcaggtcagctactgcct
caagtagggattcttacactagcccagccaaaatccaaggttcgtgctaagaaaacctcc
aaggcggctcaaaaatctgaagtgcgtaaagcgggtgctaaaataaataaacctgaaacg
ccaagcgatacagatactaatggctag
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