Morus notabilis: 112093379
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Entry
112093379 CDS
T07292
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
mnt
Morus notabilis
Pathway
mnt03013
Nucleocytoplasmic transport
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112093379
09122 Translation
03013 Nucleocytoplasmic transport
112093379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
112093379
03041 Spliceosome [BR:
mnt03041
]
112093379
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112093379
Spliceosome [BR:
mnt03041
]
Complex C
Other components
EJC/TREX
112093379
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112093379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
ABPF_N
FapA
Motif
Other DBs
NCBI-GeneID:
112093379
NCBI-ProteinID:
XP_024027424
LinkDB
All DBs
Position
Unknown
AA seq
1883 aa
AA seq
DB search
MSLLPVECAFVTEEPLREWRNGNSSFRLAGPVPMLRFLYELCSVMVRGELPFPKSKVALN
SVVFSERVSGGELGSGFADIVTQMAQDLTMPGEYRARLLKLAKWLVESGLVPLRLLQERC
EEEFLAEAEMIKIKAQELKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCGNTESP
SCSVSGATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNKIFLELIPIFPKSHAAQILG
FKFQYYQRLEVNCPVPFGLYKLTALLVQKGFIDLDSIYAHLLPKDDEAFEHYNALSSKRL
DEARKIGKINLAATGKDLMDDEKQGQGDVTIDLFTALDMETEAVAERSEELANNQILGLL
TGFLSVDDWYHANLLFDCLSPLNPVEHLQICNSLFRLIEKLISSIYNTIHQAHLQKSGSS
GASVDAMDTETSSANGSFIDLPKELFQMLSSAGPYLYRDTLLLQKVCRVLRGYYLSALEL
VGGSQAVLNSESVSGINRDPRLHLKEARSRLEDALGACLLPSLQLLPANPAVGQEIWEVM
SLLPYEVRYRLYGEWEKEDERMPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAH
ANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKDDGL
NLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGIGIELVLLQELIQQMANVQYT
EQLTEEQLDAMAGSETLRYQATSFGVLRNNKALVKSTNRLRDSLLPKDEPKPAIPLLLLI
AQHRSLVVINADAPYIKMVSEQFDRVHGTLLQYVEFLCSSVTPASAYAQLIPSLDDLVHQ
YHLDHEVAFLIYRPVMRLFKIPGSSDLLWPLDSNDSSSVATANSDSETAEHSDDVVLDLG
SPRGPIAWSDLLNTVKTMLPSKAWNSLSPGLYTTFWGLTLYDLYVPRNRYETEISKQHAA
LKALEELSDNSSSAITKRKKDKERIQESLDRLTNELRKHEENVASVRKRLSREKDKWLTS
CPDTLKINMEFLQRCIFPRCTFSMPDAVYCAVFVHTLHSLGTPFFNTVNHIDILICKFLQ
PMICCCTEYEAGRLGRFLYETLKLAYYWKSDESIYERECGNMPGFAVYYRLPNSPRVTYG
QFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTRISSVFPVTRKSGINLEKRVSKI
KGDEREDLKVLATGVAAALAARKPSWVTDEEFGMGLLELKPPSLAPKSSVGNVVGIQSGS
AINVSQNDFAGVKTSVSDSSYSVKDQMLKARPTDVRTERAESVSNSKSDSGNVKLKGGSL
PNGSDVQPSVPSAALTSGTSRSTENQKQLDDSMNRPSDENITKVALKNTSEPELRAQTKR
SVAAGSLTKPPKQDVAKDDNRTGKSVGRSSGSSISDRDTSHSSEGRLSGAANVSSVVSAN
GNTVLKSSAPSTRTSDMHGSDSKLENAAAKSSDSRVSALKEDGVEVLDAPRHSSSRAVHS
PRQEHASTSKLNDKPQKRTSPAEXRISKRRKGDTEVRDFEGEFRSSERERSVDARFGDLD
KTGADEQNIHRAADKLVDRSKDKASERHDKDHREKERADKSRGDELPEKTRDRSMERYGR
ERSVERGQDRSSDRNFDRIPEKGKDDRSKVRYNDTAVEKSHVDDRLYAQNLPPPPPLPPH
VIPQSVNSSRRDEDVDRRFGTTRHSQRLSPRHEEKERRRSEESLVAQDETKRRREDDFRD
RKREDREGLSIKVEEREREREREREREREKANILKEEMDASGASKRRKLKRDHLPSVEAG
EYSPVAPPPPLTINMSQSYDGRDRGDRKGAMIQRTGYVEEPSLRVHGKEIASKMTRRDID
PMHDREWDDEKRQRAELKRRHRK
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccttcccgtagagtgtgcgttcgttacagaggagcccctccgcgaatggagg
aacggaaactctagcttcaggctcgccggccccgttcccatgctccgctttctctacgag
ctctgctccgtcatggttcgaggagagttgccatttccgaagtctaaagtggcgttgaat
tcggttgtgttctccgaaagagtttccggcggggagttgggttccggttttgcagatatc
gttactcaaatggcgcaagatcttacaatgcctggagagtatcgtgctcgtcttttaaag
ttggcaaaatggctggtggagtctggcttggttccgttgaggcttctgcaggagcgctgt
gaggaagagtttctggcggaggctgaaatgataaagataaaggctcaagagttaaaaagt
aaagaggttagagtaaacacccgtcttctttatcagcaaactaaatttaatcttctcaga
gaagagagtgaagggtatgcgaagttggttacccttctttgtggaaacacggaatctcca
tcgtgcagcgtatcaggagcaacaattggcataattaagtcattaattggacattttgac
ctggatccaaatcgtgtctttgacattgtattagaatgttttgagcttcagccagacaat
aaaatctttttggagctaattccaatatttcccaagtctcatgctgcacaaattcttggt
tttaagttccaatattatcagcgtctggaagtaaactgtcctgtaccatttggattatat
aagcttacagccttgctggtgcagaaaggttttatagatctcgactccatatatgcacat
ttacttccgaaggatgatgaggcatttgagcattataatgcattatcttctaagcgactt
gatgaggctagaaagattgggaaaataaatcttgctgctacggggaaagatctaatggat
gatgagaaacaaggacaaggagatgtgaccatagatcttttcactgctttagacatggaa
actgaggcggtggctgaacggtctgaagagcttgcgaataatcaaattttgggcttgctc
actggcttcctttctgtggatgactggtaccatgcaaatttgctttttgattgtctctca
cctctaaatccagtggagcatttacaaatctgtaacagcttgtttaggctcattgaaaaa
ttaatctcttcaatatataacactattcatcaagcccatctccaaaaatctggttcttct
ggagccagtgttgatgcaatggatacagaaacttcctcagccaatggatcttttatagat
ctccctaaagagctttttcagatgctttcttctgctggaccttatctttaccgtgatact
ttattgttgcagaaggtgtgtcgagtgttgagagggtactacttgtcggcacttgagctt
gtaggtggcagtcaggcagttctgaactctgagtcagttagtggcataaatcgagatcct
cgcctgcatctaaaggaagcaaggtcaaggttagaggatgccttgggagcatgtttactc
ccttctttacaattgttgcctgcaaaccctgcagttggacaggaaatctgggaagtcatg
agtcttcttccgtatgaggtgcgatatcgcttgtatggtgaatgggaaaaagaagatgag
aggatgcccatgcttcttgctgcaaggcaaacagccaagttggacactagaaggattttg
aaacggcttgccaaagaaaacttaaagcagcttggtcggatggttgcaaaattagctcat
gctaatccaatgactgtacttcggaccattgttcaccagattgaggcatacagagatatg
ataactcctgttgtagatgcatttaagtatcttacccagcttgagtacgatatattggaa
tatgttgtgattgaacgtttggcacaagggggacgtgataagctcaaagatgatggcctt
aatctgtcagactggcttcaatccttggcttcattttggggtcacctgtgtaagaaatac
ccatcaatggaactgaggggccttttccaatatcttgtgaatcagttgaaaaaggggata
gggattgaacttgttcttctgcaggagcttattcaacaaatggcaaatgtccagtacacg
gagcaactaactgaagaacagctagatgctatggccgggagcgagactctgcggtatcag
gcaacctcttttggcgtgttgcgaaataacaaggcattggtcaagtctacaaacagacta
cgggactcattacttccaaaggatgaacccaagccggcaatcccactgttgttacttatt
gctcagcatcgttctttggttgtaataaatgcagatgcaccttacattaagatggttagt
gagcaatttgatcgtgttcatggaacgcttcttcagtatgtggagttcctttgcagttct
gtgacaccagcatcagcttatgctcagttgattccctcacttgatgatcttgtccatcaa
taccaccttgatcacgaggttgctttcttaatttatcgccctgtaatgagactgttcaag
atcccggggagttctgatctcttatggcctttagacagcaatgattcatccagtgttgca
actgcaaattcagattctgaaactgctgagcactctgatgatgtggttttggaccttggc
tctcctcgagggcccatagcgtggtctgatcttctgaatacagttaaaaccatgttgcca
tcaaaagcttggaatagcctttcccctggcctctatactactttctgggggctcactctt
tatgatctttatgttcctagaaatcggtatgaaacagaaatctccaagcagcatgctgct
ctcaaagctctggaagagctttctgataactcaagttcagctattacgaaaaggaagaaa
gacaaggaaagaattcaagaatctcttgatcgcctaactaatgagctccgcaagcacgag
gaaaatgttgcctctgtccgtaagagactatctcgggaaaaggacaaatggttgacttcc
tgccctgatactttaaagatcaacatggagttccttcagcgttgtattttcccccgctgt
actttcagtatgccagatgctgtctattgtgctgtatttgtacacactctccattcactt
ggaacaccatttttcaacacagtcaaccacattgatattcttatatgcaagttcttgcaa
cctatgatatgctgctgcactgaatatgaagccggtagacttggaaggttcttgtacgag
acattgaagcttgcttactattggaagagtgacgaatcaatttatgagcgtgaatgtgga
aacatgccaggctttgctgtatattatagattaccaaatagcccacgggttacgtatggc
cagttcatcaaggtacactggaaatggagtcagagaattacacgcttgttgattcagtgc
ctggaatcaactgagtatatggaaattcgaaatgccctcataatgctgacaagaatttca
agtgttttcccagttactagaaagagtggaatcaaccttgaaaaacgggtcagtaagatc
aaaggtgacgagagagaagatctcaaggtgttggcgacaggtgttgctgccgctttagct
gctagaaagccttcatgggtcacagatgaagaattcggcatgggcctccttgaattgaag
ccaccatctcttgctccaaaatcttcagttggtaatgtagtaggcatacaaagtggttct
gctattaatgtttctcaaaatgattttgctggggttaaaactagtgtttcagattcttct
tattcagtcaaagatcagatgctaaaagcaagacctactgatgtgagaacggaaagagca
gaaagtgtttctaattcaaaatctgattcaggaaatgtaaagctgaaaggtgggtcatta
ccaaatgggtcagatgttcagccatccgtgccttcagctgctttaacatctggaacatca
agatcaaccgaaaatcagaaacaactggatgattccatgaatagaccgtcagatgaaaat
atcacaaaagtggccctgaaaaacacttcggaacctgagctgagagctcaaacaaagcga
tccgtggctgctggatcacttactaagccaccaaaacaagatgttgcaaaagatgataat
agaactggaaaatctgttggcagatcttccggttcttcaatcagtgacagagatacatct
cattcatctgaaggaaggctgagcggggctgcgaatgtttcatctgtagtatcagcaaat
ggaaacacagtcttgaaaagctcagctccatccacgagaacatcagatatgcatgggagt
gactcaaagctagagaatgcagccgccaagtcttctgactctagggtttctgcgctaaag
gaagatggggtagaagttctggatgccccaaggcactcttcttcgcgagctgtgcattct
cctagacaggaacacgcttctacttcaaaattgaatgataagccgcaaaagagaaccagt
cctgctgaanntagaataagtaaaagacggaaaggggacaccgaagtgagagattttgaa
ggtgaatttcgatcctctgagcgagagaggtctgttgatgctcggttcggtgatcttgac
aaaactggtgctgatgaacaaaatattcatagggctgctgataagctagtggatcggtcg
aaagataaggccagtgaaagacatgataaggatcatagggaaaaagagcgagctgataag
tcccgtggagatgaattaccagagaaaacgagagacaggtcgatggaaagatatggtagg
gagcgttcagttgagaggggtcaagataggagtagtgataggaattttgatagaattcct
gagaaaggcaaggacgatagaagtaaagtacgatacaatgatacagctgtagaaaaatct
catgttgatgatcgattatacgcacaaaacttgccgccaccaccgcccttacctcctcat
gtgattccccaatctgttaattctagtagaagagatgaagatgttgatagaaggtttgga
actacaagacactcgcaaaggctttctccaagacatgaagaaaaggagcggcggcgatct
gaggaatccttagttgcccaagatgagacaaaacgtagaagagaggatgattttcgagat
agaaaaagggaagatcgagaaggtttgtcaataaaggtggaggagagggaaagggaaagg
gagagagagagggaaagggaaagggaaaaggcaaacattttgaaagaggaaatggatgca
agtggagcttctaagaggaggaaacttaagagggaccatttgccctcagtagaagctggt
gagtattccccagttgcccctccacctccccttactattaatatgtcacagtcgtatgat
ggaagagataggggagaccgcaagggggccatgatccagcgcactggttatgtggaggaa
ccaagtctgcgggttcatggtaaagaaatcgccagcaagatgactcggcgtgacattgac
ccgatgcatgaccgtgagtgggatgatgagaagaggcaaagagctgagctgaagcggagg
catcggaagtaa
DBGET
integrated database retrieval system
