Morus notabilis: 112093996
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Entry
112093996 CDS
T07292
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112093996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
112093996
03009 Ribosome biogenesis [BR:
mnt03009
]
112093996
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112093996
Spliceosome [BR:
mnt03041
]
Complex A
U1 snRNP components
U1 related factors
112093996
Complex B
112093996
Ribosome biogenesis [BR:
mnt03009
]
Eukaryotic type
Pre-60S particles
Helicases
112093996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112093996
NCBI-ProteinID:
XP_024029552
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MATVAAISGPRYAPEDPTLPSPWRGLVDGKTGYLYFWNPETNVTQYERPIGSGPPQKSSS
VLISSSVHIQQSSQGQRSSNPNEDKDSYERGSNDGSKLDAASRSQQTRGAPAPSQSAARA
GVVSSSSAVIGVFSAGHGGSARGQGPLDGGSGLSAESYRRRHEISVTGDNVLPPFTSFEA
TGFPSEMLREVQNAGFSAPTPIQAQAWPIALQSRDVVAIAKTGSGKTLGYLFPGFMHLKR
SHNDSRLGPTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGAD
IVVATPGRLNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMFT
ATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLPPLEKHRRLEQILRSQEP
GSKMIVFCSTKKMCDQLARNLARQFGASAIHGDKSQSERDFVLNQFRAGRTPVLVATDVA
ARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGASGVAYTFFGDQDAKYASDLIKVLE
GANQRVPSEIRDMASRGGGMSKFRRWGSGSGGRDGGRGGYSDSSYGGRDGGRGGGRDGGR
SGWGFSSGSRDRFDRGHQNEYGRGRSRSPSPEKGSGWSDRNRGSNRERSRSRSRSRSLDK
APRAGRSFHQAMMEKGRPSSPHQKQHGPSFHQAMTEKGRPPSPNRKQHTPSFHQAIMEKS
WPPSPHKGFGDGGYGEEAEEGMIPQDE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgctgctatttcaggaccgcgatatgctccagaggatccaactctcccc
agtccttggaggggactggttgatggaaaaactggatatctctatttttggaatcccgag
accaatgtgacccaatatgagaggccaatcggttcgggtcctcctcagaagtcctcttca
gtgcttataagttcttcagttcacattcaacagtcttctcaaggacaacgttctagtaat
cctaacgaggacaaggatagctatgaaagaggtagcaatgatggatcaaaacttgatgct
gcatcaaggagccagcagacaagaggtgcacctgcaccatcccaaagtgctgctcgagct
ggagtggtttcctctagcagtgctgtaattggggtttttagtgctggacatggaggttct
gcaagaggacagggaccattggacggagggagtggtttgtctgccgagtcttatcgtcgt
cggcatgaaatttctgttactggtgacaatgtgctaccacctttcacatcattcgaagct
actggatttccatcagagatgcttagagaggtacaaaatgcaggattctctgctccaact
ccaattcaggcacaagcctggccaattgctcttcaaagtagagatgtagttgccattgct
aagacaggatctgggaaaaccttgggttacttgtttccaggatttatgcatctcaagcgc
agtcacaatgactctcgattaggtccaactgtgttggtattatcaccaactagggagcta
gctacacagatacaagatgaagcggtgaagtttggaaagtcatcaagaatatcttgtgcg
tgtttatatggaggagcaccaaaaggcccacagttaagagatatagaccgtggagcagat
attgttgttgccactcctggtcgcttgaacgatattctcgagatgaggaggatcagcctc
aatcaagtttcttaccttgtgctggatgaggctgatcgcatgctcgatatgggttttgaa
cctcaaataaggaagattgtgaaggaggttcctgctcgtcgccagactttaatgttcaca
gcaacatggccgaaagaggttcggaagattgcagcagatctacttgttaatcctgtccaa
gtgaacattggcaatgttgatgaacttgttgctaacaagtctatcacgcagcatgttgaa
gtactgccacccctggaaaagcacaggcgattggagcagatattgcgatcgcaagagcca
ggatcaaagatgattgttttttgttcaactaaaaaaatgtgcgatcaacttgctcgtaac
cttgctcgccagtttggagcttctgctattcatggagacaaatcccagagtgaaagggat
tttgtgttaaatcagtttcgagctggcaggactccggtgcttgtagccactgatgttgca
gccagagggttagacattaaggatatcagggtggttatcaattatgacttccctacagga
gtagaggattatgttcataggattggaaggactggaagagcaggtgctagcggagtggct
tacacattctttggcgaccaggacgcaaagtatgcttcagatcttatcaaagtattggaa
ggtgccaaccagcgagtcccatcagaaattcgtgatatggcctcacgtggaggtgggatg
tccaagttcagacgctggggttctggttctggtggccgtgatgggggtcgtggaggatac
agtgattcaagttatggtggaagggatggtggaaggggtggtggaagggatggtggaaga
agcggctggggattttcctctggttcacgtgacaggtttgatcgcggtcaccaaaacgag
tatggtaggggccgcagtcgcagtccaagccctgaaaagggttctggttggagtgatcgc
aatagaggttcaaatcgtgaacgtagccggagtcgtagtcgcagtcgcagccttgacaag
gctccacgcgctgggcgaagtttccatcaagcaatgatggaaaagggtcggccgtcctcg
ccacatcaaaaacagcatgggccaagttttcatcaggcaatgacagaaaagggtcggccg
ccttcaccaaatcggaaacagcatacgccaagtttccatcaagcaattatggaaaagagt
tggccaccatcaccgcataaaggttttggtgatggtggttatggggaagaagccgaggaa
ggcatgataccccaagacgagtaa
DBGET
integrated database retrieval system
