KEGG   Morus notabilis: 21384452
Entry
21384452          CDS       T07292                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
mnt  Morus notabilis
Brite
KEGG Orthology (KO) [BR:mnt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mnt03009]
    21384452
Ribosome biogenesis [BR:mnt03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    21384452
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WDR54 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_BBS7
Other DBs
NCBI-GeneID: 21384452
NCBI-ProteinID: XP_010097808
UniProt: W9R5L9
LinkDB
Position
Unknown
AA seq 438 aa
MEVVVASSSVDAGIGCWDLQSGAEQLRYKSCASPRHGLVCVGRRFLASSQLRNSSASSGS
VLYWTWSKPQVEVKSFPAEQIKPLAANREGTYIVGGGLSGDIYLWEVASGSLLKNWHAHY
RAVTCLVFSDDDSLLISGSEDGSVKVWSLLMIFDDYLREQASHPYVHSFSEHTLCITDII
AGYGGCNAIIVSASEDRTCKVWSLSKGKLLRNIVFPSIIDAIALDPSERVFYAGGRDGKI
YVAALNAEIPSSKKYGLHIISAFSNHSKAVTCLQYGTTGNVLISGSEDGMIRVWDARTYN
IIRVLRHAKGPVNNIILVREQLKNFQRISNSQAFLRKHASLLPPLEKYANSTDDVTETKT
VIGFQETCNKSIDAMYLSSVVAHNQIKELQQRGSAAVDMELDRVKLDCKKSMQMVEQWKK
MYENLHQFCVDELLEDGK
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggaggtcgttgtggcctcttcgtccgtcgacgccggcatcggttgctgggacctacaa
agcggcgccgagcagctccgctacaagtcttgcgcgtccccccgccacggtcttgtctgc
gtcggccgacgcttcctcgcctcttctcagctccgcaactcctccgcctcctccggctcc
gtcctctactggacttggtccaagccacaagtagaagtcaagagcttccctgcagaacag
ataaagccgctcgcggctaatcgagaaggcacctacattgttggtggaggcttgtctggg
gatatctacttgtgggaggttgctagtggtagtctgcttaagaactggcatgctcattat
agagccgttacatgcttggtattttctgacgatgactcgctgttaatatctgggtccgag
gatggatcggtcaaagtttggtcgcttttaatgatattcgatgattacttaagagaacaa
gcgagtcatccgtacgtacatagcttttcagagcacactctttgtataactgatattata
gctggatatggaggctgcaatgcgattatagtttcggcttcagaggatcggacgtgtaag
gtctggagcttatcaaaaggaaaattattaagaaatattgtgtttccatcaataattgat
gcaattgctttggatcccagtgaacgtgtcttttatgctggcggtagagatggaaagata
tatgttgccgcactcaatgctgaaattccgtctagcaaaaaatatgggctgcatatcata
agtgcattttcaaatcacagcaaggctgttacttgcttacaatacggtacaactggaaat
gttttgatctctggatcagaagatggtatgattcgtgtttgggatgctcgaacttataac
attattcgggtgttaagacacgcaaaaggtccggtgaataatattattcttgttagagaa
caacttaaaaattttcagaggatttcaaattcacaagctttcctcaggaagcacgcatca
ctattaccacctctggaaaaatatgcaaattcaacagatgatgttacagaaactaagact
gttattggtttccaagagacttgcaacaaatccatcgatgccatgtaccttagttctgtt
gtggctcataatcaaatcaaagaactacagcaaagaggttctgccgccgttgatatggaa
ctggacagagtaaagcttgattgcaagaaatccatgcaaatggttgagcaatggaagaaa
atgtatgaaaacttgcatcaattctgtgtagatgaactcttagaggatggcaaatag

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