Morus notabilis: 21385083
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Entry
21385083 CDS
T07292
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21385083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21385083
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
21385083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NapD
Motif
Other DBs
NCBI-GeneID:
21385083
NCBI-ProteinID:
XP_024026566
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MVSQLYAHEQKQDGGLGMGHSNASGDLSSEMEVDAFRRLFPLRFYEHHLAESIRPDGRAL
GKARDTTIELGAVASADGSALAKIGLTTMLAAIKMEVMTPSKESPDEGCIAIDFHMPPIC
SPLVRPGRPAEAEPVVSKQLADTILSSGMIDLKDLSLVSGKAAWMVYLDIYCLDADGSLF
DAALLSAIAAFSHLQIPVVSMNDDGKLIVVSEENGEKDIVNKEKRKLSLNRIPFSLTCVL
HKNYILADPTAEEETIFETLVTVVLDTFDQLVYLYKPGGLVLAFTSSVQDCIALTRQRLK
ELQKILDESVSGMEVD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcaactatatgcacatgaacagaaacaagatggaggtttgggaatgggacat
tcaaatgcttcaggggatttgtcatcagaaatggaagtggatgctttcagacgacttttc
cctcttcgcttttacgagcatcatctcgccgaatcgattcgacccgatggtagagcgctt
gggaaagcaagagatacaactatagaactaggagctgtagcatctgctgatgggtcggca
ttggctaagattggtttaaccaccatgttggctgctattaaaatggaggtcatgacccct
tcaaaggagtcaccagatgagggatgcatagctattgatttccacatgcccccgatttgt
tctccactcgttaggccaggtaggccagctgaggcagagccggttgtgtcgaagcagttg
gctgatactatattaagttctggaatgattgatttaaaggatttatcattggtcagtgga
aaggctgcttggatggtttacttggacatatattgtttggatgctgatggttctcttttt
gatgctgcgttgctatcagctattgccgccttctctcacttgcagattcctgtagtttct
atgaacgatgacggaaagctcatcgttgtttccgaggaaaatggagaaaaagatatagtt
aataaagagaaaagaaagctcagtttaaacaggattccattttccttgacatgtgtactt
cacaagaattacatattggctgaccctactgcagaggaagagactatttttgaaaccctt
gttaccgtggttttggatacgtttgatcaacttgtgtatctttacaagccaggtggactg
gttcttgccttcacatcatctgttcaggattgtattgcattaaccaggcaaagattgaag
gaacttcagaagatcttagatgaatcagtttctggaatggaggttgactag
DBGET
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