Morus notabilis: 21385340
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Entry
21385340 CDS
T07292
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
mnt
Morus notabilis
Pathway
mnt03013
Nucleocytoplasmic transport
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
21385340
03015 mRNA surveillance pathway
21385340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21385340
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
21385340
mRNA cycle factors
P-body specific factors
21385340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
21385340
NCBI-ProteinID:
XP_024023616
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MDQQEDEGRAGTEQHHGKQDDEEAAARLEEIKKSIEAKMVLRQSNLNAERPDSGFLRTLD
SSIKRNTAVIKKLKQINEEQREGLLDELRSVNLSKFVSEAVTSICDAKLRTSDIQAAVQI
CSLLHQRYKDFSPSLIQGLLKVFFPGKSGDDSDTERNLKAMKKRSTLKLLLELYFVGVIE
DSGIFVNIIKDLTSTEHLKDRDTTQTNLTLLASFSRQGRIFLGLLLSGQEIYEELFKGLN
ITADQKKLFRKALYSYYDAAVELLQSEHASLRQLEHENAKILNAKGELSDENATSYEKLR
KSYDNFYRNITSLAEALDTQPPVMPEDGHTTRVTSGEDTSSTAAGKDSSVVEALWDDEDT
RAFYECLPDLRAFVPAVLLGETESKLNEQSVKTQEQPTEPAPESDQGQQATQDTGEVSTD
SGVLQEGKSIEKGKEKEEKDREKSKDPEKEKGKEKDTDRKGETEKEKLKSLEGTNLEALL
QRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRALFNVPRTSLELLPYYSRMVATLSTCM
KDVASMLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPSGLVFSCLKACLD
DFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYY
LCKPPERSARIAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSDCEPYLLKCFMK
VHKGKYGQIHLIASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFL
GELYNYEHVDSSVIFETLHLILVFGHGSPEQDLLDPPEDCFRMRMVITLLETCGHYFDRG
SSKRKLDRFLVHFQRYVLSKGALPLDIEFDLQDLFADLRPNMSRYSSIEEVNAALVELEE
HEHTISTEKTSSEKHSDTEKASSRSSPNPISANGQSVVNGNEEYGGVHNDLADSDSDSGS
DTIDPEGQDEEELDEENHDDERDSDEDDDDDGVAPASDEDDEVHVRQKMVEVDPQEEASF
DQELRAVLQESMEQRRQDLRGRPTLNMMIPMNVFEGSSKDHGRGIGGESGDEALDEEAGL
HKEIQVKVLVKRGNKQQTKQMFIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEE
LNGLGTQTLNHVQGGNSRILSRGHVWEGTSGKAAGPRHRHHNYSSGGVYYSRKK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaggaggatgaagggcgtgctggaactgaacaacatcatggcaagcaagat
gatgaggaggctgctgctcgccttgaggagatcaaaaagtcaattgaagcaaaaatggtt
cttcgacagagcaatttaaatgctgaaagacctgactcaggcttccttaggacattggat
tctagtattaagcgcaacacagcagttattaaaaaactgaagcagataaatgaagagcag
cgtgaagggctgcttgatgagttgagaagtgttaatcttagcaaatttgtcagtgaagct
gttacctccatttgtgatgccaagcttagaacatcagatatacaagcagcagttcagatc
tgctctttgcttcatcaaagatacaaagacttctcgccaagcttgattcaagggcttttg
aaagtattctttcctgggaagtcaggggatgactcagatacagagaggaacctgaaggcc
atgaagaagcgtagcacgttgaaacttcttttggaactttactttgttggagttatagaa
gacagtggtattttcgtaaacatcattaaagatcttacaagcaccgaacatttgaaggat
cgggatactactcagacaaatttgacgcttcttgctagtttttctcgacaaggaagaata
tttcttggacttctgctatctgggcaagaaatttatgaagagctttttaagggtcttaat
atcacagcagatcaaaagaaacttttcaggaaggcattgtattcatactatgatgctgca
gtagaacttcttcagtctgagcatgcatcacttcgccaattggagcatgaaaatgcaaaa
atcctcaatgctaagggggagctaagtgatgaaaatgccacatcatatgaaaagctgcga
aaatcttatgacaatttctaccgcaatattacatcgttagcagaagcacttgatacgcag
cctccagtaatgccagaggatggtcacacaactagggttacttccggagaagacacttca
tctactgctgctgggaaggattcatccgttgttgaagcattatgggatgatgaagatact
agggctttctatgaatgtttgccagatctcagagcatttgttccagcagtactgttgggg
gaaacagaatccaaattgaatgagcaatctgtgaagacacaagagcaaccaactgaaccg
gcacctgaatcagaccaaggccaacaagctacgcaagacactggagaggtttctacggac
tctggtgtgttgcaggagggcaaaagcatagagaaaggaaaagagaaggaagaaaaagac
agagaaaagagtaaagacccagaaaaagagaaagggaaagaaaaggacactgatagaaaa
ggagagacagaaaaggagaaactaaaaagtcttgaggggacaaatttagaagctctgttg
cagaggcttccgggttgtgtgagccgtgaccttatcgatcaattgactgtagaattttgt
tacttgaattcaaaagcgaaccgaaagaagcttgtgagggcattgtttaatgtccctagg
acttcgttggaactactaccatattattctcgcatggttgctacactatcaacttgtatg
aaggatgtagcttctatgcttcttcaaatgctggaggaggagtttaacttcttaattaat
aaaaaggatcaaatgaacattgagacaaagattaggaacattcggtttattggagagctg
tgcaagttcaaaattgcaccgtctggccttgtttttagctgtttgaaggcttgtttggat
gatttcacgcatcacaacattgatgttgcttgcaatcttctggagacctgtggtcgtttt
ctgtatcggtcacctgaaactactgttcggatggctaacatgttggagatattgatgcgt
ttgaaaaatgtcaaaaatttggatcctaggcacagcactcttgtagaaaatgcctactac
ttgtgcaaaccacctgaaagatctgcccggattgctaaagtccgtcctccactgcatcag
tatataagaaaattgctattttcagaccttgataagtctacaattgagcatgtgctgagg
caacttcgtaaattgccatggagtgattgtgagccatatcttttaaaatgctttatgaag
gttcacaaggggaaatatggtcaaattcacttgattgcctctctcactgctggcttgagt
cgttatcatgatgattttgcagtagctgttgttgatgaggttttggaagagattcggctt
ggactagaattgaatgattatgggatgcagcaaagacgcattgcccatatgagattctta
ggagagttatacaactatgagcatgtagattcatctgttatttttgagacgctgcatttg
attcttgtatttggtcatggctcaccagagcaagatctactggatccgccagaggattgt
ttccgcatgaggatggttattactcttcttgaaacctgtggacactactttgaccgaggc
tcttctaaaaggaaacttgatcgctttttagtacacttccaaagatatgtactcagcaaa
ggtgctctaccactagatattgaatttgacttacaggacttatttgcggatttacgcccc
aatatgtcaagatattcatccattgaagaagtcaatgcagccctagtggaacttgaggag
catgaacacacgatctcaactgaaaagacaagcagtgagaaacactccgacactgaaaag
gcttcgagcaggagttctcccaatcctatttcagcaaatggacagagtgttgttaatggt
aatgaggaatatggcggggttcacaatgaccttgcagacagcgacagtgattctggaagt
gacaccattgatccagaggggcaggatgaagaagagttggatgaagagaatcatgatgat
gaacgtgatagtgacgaggatgatgatgatgatggggttgcacctgcttcggatgaagat
gatgaagtccatgttaggcagaagatggtggaagtcgaccctcaagaagaagcaagtttt
gatcaagagctcagggctgttttacaggagagcatggagcagcgcaggcaagatttacga
ggaagacctacattaaacatgatgataccgatgaatgtatttgagggatcctccaaggat
catggccgtgggatcggaggggaaagtggtgatgaggcgttggatgaggaagctggattg
cacaaggaaatccaggtgaaagtccttgtgaagcgtggtaacaagcaacaaactaagcag
atgttcatccctcgggattgctctctcatacagagcacaaaacagaaggaagcagctgag
cttgaagagaaacaagacatcaaaaggctggttttggaatacaacgatagagaggaggaa
cttaatgggttggggacccaaactttgaaccatgtgcagggtggcaacagcagaattcta
tcacgcggtcacgtgtgggaaggaaccagtgggaaggctgccggcccacgtcatcggcat
cataactattcaagtggcggagtttattacagcaggaaaaagtga
DBGET
integrated database retrieval system
