Morus notabilis: 21385709
Help
Entry
21385709 CDS
T07292
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21385709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21385709
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21385709
mRNA degradation factors
5'-3' decay
Decapping complex
21385709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
PsbI
Motif
Other DBs
NCBI-GeneID:
21385709
NCBI-ProteinID:
XP_010109206
UniProt:
W9S1T2
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MEAFESGSRIQEAPNSQDLKQFGNDSTDTVFDASQYAFFGKDVLEEVELGGLEDEEEDLP
AAGFEEEEFLYDKEENAVLRSLSDVDDLASTFSKVMSGPRNTGIVGDIGSRQNSSAAEWA
QEEFPNGINHHLDSDGIPEGKRWSSQPFSAARLTESKPLYRTSSYPEPQQQQQPQHTHYS
SEPIPVPKSSFPSYPSPGGRTPQDSPNHHSGHLNMQYHAGGPHGGLSSPNLPPFSNSQVP
LAGLAHGSHFGGNLPQLPPCLSVNNRLPSQWINQPGMFPGDNSALLNSMMQPQLSHQNGL
MPPQLMTQQHRIHPTVQPSFNHLSGMQSQLFNPHLSPSPPLMSKFDAMLGLGDLRDQKPK
SFQKGRLNLRYSQLGFDTSNQKGDGGWPPFRSKYMTAEEIDGILRMQLAATHSNDPYVDD
YYHQASLAKNSAGAKLRHHFCPTHLRELPPRARANNEPHAFLQVDALGRIPFSSIRRPRP
LLEVDSPNSSGHGSTDQKASEKPLEQEPMLAARVAIEDGICLLLDVDDIDRFLQFNQLPD
GGVHYKHRRQALLEDLAASLQLVDPLGKSGGTIGLVPKDDLVFLRLVSLPKGRKLLARYL
QLLFLDGELMRIVCMAIFRHLRFLFGFLPSDPGAAETANNLAKVVSSCIQEMDLGSLSAC
LAAVVCSSEQPPLRPLGSSAGDGASLILKSVLERATELLTDPNAASNYNMQNRALWQASF
DEFFGLLTKYCSNKYDSIMQSLLTQGPTNTAVIGADAARAISREMPVELVRASLPHTDVR
QRQLLLDFTQRSMSLGASNTPPGGNDGRMNSESVLS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgttcgagagtgggagtcgtattcaagaggctcccaattctcaggatctcaag
caattcggaaacgattccacagatactgtatttgatgcatctcaatatgcgtttttcgga
aaagatgtgttggaagaagttgagttgggaggcttagaagatgaagaggaggatttgcct
gctgctgggtttgaggaggaggagtttctttatgataaagaagagaatgcggttttaagg
tctctatccgatgttgatgatttggcgagtacattttcgaaggttatgagtggaccaaga
aataccggaatagttggtgatattggatctagacaaaactcatctgctgctgaatgggca
caagaagagtttcccaacggaatcaaccatcatttagattctgatggcattccagaaggt
aaaaggtggtcttcacagcctttttctgctgcccgccttacagagtcaaaacctttgtac
agaacttcgtcgtaccctgagccgcaacaacagcagcaaccacagcacactcactattcc
agtgaaccaattccggtgccaaaatcatctttcccttcatatccttcaccaggtggcaga
actccgcaggattcaccaaaccaccactcaggtcacctgaatatgcaatatcatgctggg
ggaccccatggaggattgtcttcaccgaacctccctcccttctctaattcgcaggttcca
ttggctggtttagctcacggatcacattttgggggaaatttgcctcaacttcctccgtgt
ctatctgttaataaccggttgcctagccagtggatcaaccagcctggcatgtttccggga
gataattctgccttgttaaatagtatgatgcagccacagttgtcacatcaaaatggttta
atgcctcctcaattgatgactcagcagcatagaatacaccctacagttcagccatcgttt
aaccacttatcaggaatgcagtctcaactatttaatccccatctttctccatcccctcct
ttaatgagcaagtttgatgcaatgcttggtcttggtgatcttagagaccaaaaaccgaag
tcttttcagaaaggtagactgaatctgcgttattcccagctgggttttgatacgagtaat
cagaagggtgatggtgggtggccaccgtttagatccaagtacatgacagctgaggaaatt
gatggtattctccgaatgcaacttgctgcgacacacagtaatgacccgtatgtagatgat
tattaccaccaggctagtcttgcgaaaaattctgctggagcaaagctgagacatcacttt
tgcccaactcacttgagggagcttccaccacgagcacgtgccaacaatgaaccacatgct
tttcttcaggttgatgctcttgggaggattcccttctcttcaattcgtaggcctcgtcct
cttcttgaagtggactctccaaattcatctggtcatggcagcactgatcagaaggcttct
gaaaagcccctagaacaggagcctatgcttgctgctagagttgcaattgaagacgggatc
tgtcttcttcttgatgtagatgatatagaccgtttcctgcaattcaatcagctgcctgat
ggtggagtacactacaagcataggcgacaggcgttgctggaggaccttgccgcatcactt
caactggttgatccacttggaaaaagtggcggcacaattgggcttgttccgaaggatgat
cttgtgttcttaaggttagtttctctacctaagggaaggaagcttcttgcgaggtatctt
cagcttctttttctagatggtgagctcatgcgtatagtttgcatggctattttccgtcat
ttgcggttcctgtttggttttctcccctctgatcctggagcagcagaaaccgcaaataac
cttgcaaaagtcgtttcatcgtgcattcaagaaatggatctgggttcgcttagtgcctgt
cttgcagcagtagtttgttcatcagagcagcctccacttcgtcctcttggcagctctgcg
ggagatggggcttctcttattctgaaatcagttcttgagcgggctactgaactcttgact
gaccctaatgctgctagcaactataatatgcaaaaccgtgctctttggcaggcttcattc
gatgaattttttggtctcttaaccaagtactgctcgaataaatacgatagtatcatgcag
tccttgctcacgcaaggtccaacaaatacggcggttattggagcagatgcagcaagagct
attagtcgcgaaatgccagttgagctcgtacgggcaagccttccccatacagatgtccgc
cagaggcagctattgttggatttcacacagcggtccatgtctctgggtgcatctaacact
ccccctggcggaaatgatggccgcatgaattccgaatcggtgctcagttga
DBGET
integrated database retrieval system
