Morus notabilis: 21385760
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Entry
21385760 CDS
T07292
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
mnt
Morus notabilis
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnt03009
]
21385760
Ribosome biogenesis [BR:
mnt03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
21385760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
VPS8_N
Motif
Other DBs
NCBI-GeneID:
21385760
NCBI-ProteinID:
XP_024027160
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MGKGGDEALVVCSDKSMATGITIWDVETGDHILHIPTCASPRHGLLCFRNHFLFASQIHR
HGSVGGGAVFMWCLNKPQSPVRSYPMEAIGPLSCTKDGIYLGGGALSGNAYIWEASSGKL
LKTWRAHRRSLTCMLFSDDGSLLISGSDDGMICVWPMISLLDVEDSGSSPPLLHYSLDHS
SSITGLATTSGISSPILVSSSSDGTCKFSDLVLGRILQTVVYPVGITAVVLDPTEELVFC
GGLDGRIFINKLDICLMEDPFSLSQDQPIMLQGHNGAITALTFSQSGLVSASVDCTISIW
DATHWTITKKFNHQKGGVTNLAVIPRSALLSAANSRKVLSAFRVSGLDKYPRRSNSSEET
ITLLSSSCSLKESQSSFHFQSSNSCQQTLDLQMQKDWTPAAMQMKVETSLENRMWAMKMA
KHVMEMNRHLQSRLLDLMESRLLWSKETNLPNTKKRKKLLMNMVESSSNRNDHPFQGEDQ
SNFPC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagggggtgatgaggcattggtagtgtgcagtgacaagagcatggcaacagga
ataacaatatgggacgttgagacaggggatcatatcctccacatacccacttgtgcttct
cctcgccatggcttgttgtgcttcagaaatcacttcctttttgcttctcagattcacagg
catggctctgttggaggcggtgctgttttcatgtggtgcttgaacaagcctcagtcacct
gtgagaagctatccaatggaggccattggaccactttcttgcaccaaggatggtatatat
cttggaggtggagctctatctgggaatgcttatatttgggaggcttcaagtggaaaactg
ctcaaaacttggcgcgcccaccgtagatctttgacctgtatgctgttttcggatgatggt
tctcttctcatatctggttctgatgatggtatgatctgtgtttggcctatgattagtttg
ctagacgtagaagattctggaagctcccctcctttgttgcactactccttggatcatagt
tcttccataactggtctggccactacatcaggcatctcaagtccaattttagtatcaagc
tcctcagatggcacatgcaagttctcagatttggtcttgggaagaatcttgcaaactgta
gtttacccggtagggataactgcagttgttcttgacccaacagaagagcttgtattttgt
ggaggccttgatggtagaattttcatcaacaagcttgacatttgcctaatggaggatcct
ttttccctttcacaagatcaaccaattatgctgcaaggacacaatggagcaataactgcg
ttgactttcagccaatctggtctggtatctgcatctgtggattgcacaatcagcatatgg
gatgctactcattggacaatcaccaaaaaattcaaccaccaaaaaggaggagtaactaat
ttggcagtcataccgcggtctgcgctcctttcagcggcgaatagtcgaaaagttctaagc
gcatttcgggtttcggggcttgacaagtaccctcggcgttctaactcatccgaggaaacg
atcactcttctttcctcaagctgctccctcaaagaaagccagagttccttccattttcaa
agcagtaattcatgccaacagacactggacttgcaaatgcagaaagactggacaccagca
gcaatgcaaatgaaagtggaaacaagtttggagaacagaatgtgggcaatgaagatggca
aagcatgttatggagatgaatcggcatttgcaatcgcgtcttctggacttgatggagagc
agattgttatggtccaaggaaaccaatttacccaacacaaagaagagaaagaagctccta
atgaatatggttgagagttcctctaataggaatgatcacccatttcaaggagaggatcaa
tcaaatttcccgtgttaa
DBGET
integrated database retrieval system
