Morus notabilis: 21386574
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Entry
21386574 CDS
T07292
Name
(RefSeq) uncharacterized protein LOC21386574 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mnt
Morus notabilis
Pathway
mnt03008
Ribosome biogenesis in eukaryotes
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
21386574
09123 Folding, sorting and degradation
03018 RNA degradation
21386574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21386574
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21386574
03009 Ribosome biogenesis [BR:
mnt03009
]
21386574
03016 Transfer RNA biogenesis [BR:
mnt03016
]
21386574
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
21386574
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
21386574
Ribosome biogenesis [BR:
mnt03009
]
Eukaryotic type
Pre-60S particles
RNases
21386574
Transfer RNA biogenesis [BR:
mnt03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
21386574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
21386574
NCBI-ProteinID:
XP_024021438
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MGVPSFYKWLLESFPLSVVDVVFDPSPAPDLTGANPNGMEFDNLYLDMNGIIHPCFHPEG
LPAPKTYEEVFKSVFKYIDKVFSVVRPRKLLYLAIDGVAPRAKMNQQRTRRFRAAKDAAD
EMSFMAPRKEEIGGSVSESQEKSTCLEQSSKLDSNVITPGTEFMALLSSALHYYIHLRMN
EEPGWQGIKVILSDACVPGEGEHKIMSYIRSQRNLDGFDPNTRHCLYGLDADLIMLALAT
HEIHFSILREDVKKPSSFKKSGRYSSQIVPLQVEVVSETTEDYISKLKFQFLHVWILREY
LSYAMEIPDQKDGDLERLIDDFVLICLFVGNDFLPHMPSLEISEGAIDLLMTIYKKEFVR
MGGYITKSFKVNLNKMKYFLEAVGSHEGAILRKRGQKKKERDFLDRRFSKNTSVRTTPVG
GDSMNSRALEVRAPKGSVSLSTTTKVDKIKYGEVGWKERYYAEKFEAETEDDCERIRQDV
VLKYTEGICWVMHYYYEGVCSWQWFYPYHYAPFASDFHDIGKLKIQFTLGQPFKPVDQLM
AVLPSASAHAALPLFYRKLMTETSSPLFAFYPTDFELDLNGKRFSWQAICKLPFIEESLL
LSEIARVEHTLTDEERRRNRLGLDVLFVHSSHSFSESLVLFSQRNELVAQVKEKINPKFS
AGMNGYMFIPDKTVKPEQIDSPIDGMEMIANNKVLSLFYDNPRFLGHIPRPPEKVAWPSK
CICKKDIKPKPFLWHEQTAVVGRLHSLMPIRNSVSGSHLAKSARQLVLTWCLEMQQKSTG
SLEGGEGASADGVLCCEHSRTVCPGGVGANGPPTVPCTVEVASVGDTAGDKSCSNGGDGI
SSARKSKKRRWKSKQINDCELMASRSNLQGTSSAHVTGDDKSCSNGRSDGQVVVVLDNNQ
RRDESTHQLVVDRTDDDKSSIYRELRKRIKMFKRNKGGIVPNVNVDGLSCNMNLKKGICA
DETPCEKTIAADELRTQAVGVPDNNQGGDESTHQLQDQTAGDKRSTDGGSGKRKQNNDCE
FSDHSLGANGMVSRSNLQGTSSAHVTGDDKSYSNGRSDEQAVVVPDNNQRRDESTHHLVV
DRTDGDKSSIYGELRKRIKKFKRNKGSIVPNVHVDGLSCNMNLKKGICADETPCEKTIAA
DELRTQAVGVPDNNQGGDESTHQLQDQTAGDKSSTDGGSGKRKQDNDCEFSDHSLGANGM
ASRSNLQGTSSEHVTGDDKSFSNGRFDEQAVVVPDNNQRGDESTHQLVVDQTDGDKRSIY
GELRKRIKKSKRSKGSIVPNVHIDGLSCNMSLKKGICADKTPCEKTIAADESRTQAVGVP
DNNQGGDESTHQLQDQTAGDKSSTDGGSGKRKTKQRRKKGNKLIPNEDGGTVGLSSNFNL
EKGICAEGQGEKTIVAELSKQAVGVQGKEELACQLLVDQTADDKSIVHEGKDGISCHVDL
DKGIFAKGAHRGKTIAAVVTRKQVGVPDKNQGGDELTYQLQINQKAGGESSIDGGSRKRK
QEQRQKRGTAIPDEYVGLDGLACCSNLVETVCASGHEGDKKKVCGKSLGPKQGQEKRNVI
PDNIVGGIESTFSTLREAVYATPTETKGN
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccatcgttctacaaatggcttctcgaaagtttccctctctcggtggtcgac
gtcgtattcgatccgtcgccggcgccggacctcactggagctaatcctaacggcatggag
ttcgacaatctctacctcgacatgaacggcatcatccacccctgtttccaccccgaggga
ttgcctgctccgaagacgtacgaggaggttttcaaatctgtgttcaagtacatcgacaaa
gttttctccgtcgtcagacctcggaagctgttatacctggcaatcgatggtgttgcgcct
cgagctaagatgaatcagcaacggactcgccgattccgggctgctaaggatgcggctgat
gagatgagtttcatggctcctcgcaaagaggagattggcgggagtgtctctgaatcacaa
gaaaagtctacttgtttggagcagtctagtaaacttgattcaaatgtcatcacacctgga
actgaattcatggcattgttgtcttcagctcttcattattatatacacttgagaatgaac
gaggagccagggtggcagggaatcaaggtaatactttctgatgcctgtgtacctggtgag
ggggagcataaaataatgtcttatatccgctcgcagcggaatctggatggttttgatcca
aatacgagacattgtttgtatggcctggatgcagatcttatcatgcttgcactagcgaca
cacgaaatccatttttcgattctgagagaggatgttaaaaaaccaagttcgtttaagaaa
tctggaaggtattcttcgcagatagttccactacaagtagaagtggtcagtgagactacg
gaagactacatttcaaagctgaaatttcagtttctccatgtttggatccttagagagtat
ttatcatatgctatggaaatcccagaccagaaggatggagatttggagcgtctcattgat
gattttgtcctcatttgtttgtttgtgggaaatgactttctacctcacatgccttcactg
gaaatatctgagggggctattgatttgctcatgacaatttacaaaaaggaatttgtaaga
atgggcggttacataactaaatcttttaaggtaaatttgaataagatgaagtacttttta
gaagccgtgggatctcatgaaggtgccatcttgagaaaacgtgggcagaaaaaaaaggag
agggatttcctggatcggcgtttttcaaagaatactagtgttagaacaacacctgttggt
ggagattcaatgaactcccgtgcgctggaggttcgagcaccaaaaggatccgtctcactt
agcacaactacaaaagttgacaagattaaatacggagaagtgggttggaaagagagatat
tatgctgaaaaatttgaggctgaaactgaggatgactgtgagagaattcggcaagatgtg
gtgttgaaatatacagagggcatttgctgggttatgcattactattatgaaggtgtatgc
tcctggcaatggttttatccttatcattatgctccatttgcttcagatttccatgatatt
ggaaaattgaagattcaattcacacttgggcaaccctttaaaccagttgatcagttgatg
gctgtattaccttctgcaagtgcacacgctgctcttccgttgttttataggaagcttatg
actgaaacgtcatcacctttattcgctttttatcctacggattttgagcttgatttgaat
ggaaaacggttttcttggcaagctatctgtaaacttccattcattgaagagtccctactt
ctttcagagattgcaagagtagaacacacattgacggatgaggagagacgaaggaaccgt
ttgggcttggatgtacttttcgttcacagttctcattctttttcagagagtttagttctt
ttcagtcaaagaaatgagttggtggctcaagttaaagagaaaattaacccaaaattcagt
gccggaatgaatgggtacatgttcattcctgataaaactgtgaagccggagcaaatagat
tcgccaattgatggaatggagatgattgcaaataataaagtcttgtccttgttctatgat
aatcctcgcttcctagggcatattcctagaccgccagagaaagttgcatggcctagcaag
tgtatctgcaagaaagacattaaacctaaaccatttttgtggcatgagcagacagctgtt
gttggacggttacattctctaatgcccatccgcaattctgtctctggctcccatcttgca
aaatcagctcgtcaacttgtgttgacgtggtgccttgaaatgcagcaaaagagcacagga
tctctggaaggcggtgaaggtgcaagtgcagatggagtgttgtgctgtgaacattcgaga
acagtttgccccggtggtgttggtgcaaatggacctccaaccgttccatgtacagtagaa
gtggcatctgtaggtgatactgcaggtgacaagagttgcagtaatggcggtgatggaata
tcatctgctcgtaaaagtaagaagcgaagatggaaaagcaaacagatcaatgattgtgaa
ttaatggcgtcacgttcaaatttacaaggaacatcatctgcacatgtcactggagatgat
aagagttgcagtaatggtcgatctgatggacaagttgttgtcgttctggataacaatcaa
cgcagagatgaatcgacacaccaattggtggtggatcggacagatgatgataaaagcagc
atttatcgtgaacttcggaagcgtataaagatgtttaaacgaaataaagggggtatagtc
cccaatgtcaatgtagatggattatcttgcaatatgaatttgaaaaaaggaatttgtgct
gatgagactccatgtgagaaaaccatagcagcagatgaattgaggacacaagctgttggt
gttccagataacaatcaaggtggagatgaatcaacacaccaattgcaggatcaaacagct
ggtgataaaaggagcactgatggtggatctggtaagcgtaaacagaacaatgattgtgaa
ttctctgatcactctttgggtgcaaatggaatggtgtcacgttcaaatttacaaggaaca
tcatctgcacatgtcactggagatgataagagttacagtaatggtcgatctgatgaacaa
gctgttgtcgttccagataacaatcaacgcagagatgaatcgacacaccatttggtggtg
gatcggacagatggtgataaaagcagcatttatggtgaacttcggaagcgtataaagaag
tttaaacggaacaaaggcagtatagtccccaatgtccatgtagatggattatcttgcaat
atgaatttgaaaaaaggaatttgtgctgatgagactccatgtgagaaaaccatagcagca
gatgaattgaggacacaagctgttggtgttccagataacaatcaaggtggagatgaatca
acacaccaattgcaggatcaaacagctggtgataaaagcagcactgatggtggatctggt
aagcgtaaacaggacaatgattgtgaattctctgatcactctttgggtgcaaatggaatg
gcgtcacgttcaaatttacaaggaacatcatctgaacatgtcactggagatgataagagt
ttcagtaatggtcgatttgatgaacaagctgttgtcgttccggataacaatcaacgcgga
gatgaatcgacacaccaattggtggtggatcagacagatggtgataaaaggagcatttat
ggtgaacttcggaagcgtataaagaagtctaaacggagcaaagggagtatagtccccaat
gtccacatagatggattatcttgcaatatgagtttgaaaaaaggaatttgtgctgataag
actccatgtgagaaaaccatagcagcagatgaatcgaggacacaagctgttggtgttcca
gataacaatcaaggtggagatgaatcaacacaccaattgcaggatcaaacagctggtgat
aaaagcagtactgatggtggatctggtaagcgtaaaacgaaacagagacgtaaaaaaggc
aataagttaattcccaatgaggatggaggtacagttggattatcttccaattttaattta
gagaaaggaatttgtgctgagggtcaaggtgagaaaaccatagtagctgaattaagtaaa
caagccgttggtgttcaaggtaaagaggaattggcatgccaattgctggtggatcaaaca
gctgatgataaaagcatcgtccatgaaggtaaggatggaatatcttgccatgtggatttg
gacaaaggaatttttgcaaagggggcgcatcgtggaaaaaccatagcagcagttgttacg
agaaaacaagttggtgttccagataaaaatcaaggtggagatgaattgacataccaattg
cagatcaatcaaaaagctggtggtgaaagcagcattgatggtggatcgaggaaacgaaaa
caagaacaaagacagaagagagggactgccattccagatgagtacgtggggctggatgga
ttggcttgctgttcgaatttggtagagacagtttgtgcaagtgggcatgaaggtgataaa
aaaaaagtttgtggcaaatcattgggaccgaaacagggacaggaaaaacgtaatgttata
ccagacaacattgttggaggcatagaatcaacattttcaactttgagggaagccgtctat
gcgactccgactgaaactaaaggaaactga
DBGET
integrated database retrieval system
