Morus notabilis: 21386780
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Entry
21386780 CDS
T07292
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
mnt
Morus notabilis
Pathway
mnt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
21386780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnt04121
]
21386780
03036 Chromosome and associated proteins [BR:
mnt03036
]
21386780
Ubiquitin system [BR:
mnt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
21386780
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
21386780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_EML_2
MIOS_WD40
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
21386780
NCBI-ProteinID:
XP_010099415
UniProt:
W9RKE4
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MENTTQESHLRSENSVTYESPYPLYSMALSSSSSQSRTRNHRIAVGSFIEEYANRVDLLS
FDAETLTLTAHPELSFDHPYPPTKLMFHPSSVQKSFDVLASSGDYLRLWEVRDTSIEPIS
VLNNSKTSEFCAPLTSFDWNDVEPKRIGTSSIDTTCTVWDIEKGVVETQLIAHDKEVYDL
AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD
SNKVVILDIRSPTTPVAELERHRASVNAIAWAPQSYRHICSAGDDTQALIWELPTVAGPS
GIDPMSMYSAGAEINQLQWSAAQPDWISIAFANKMQLLKV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacgacgcaagaatcccatctccgatccgaaaattccgtgacctatgaatcc
ccttaccctctctactccatggccctctcctcctcctcttcccaatcccgaacccgcaac
caccgcatcgccgtcggcagcttcatcgaggaatacgccaatcgcgttgacctcctttcc
ttcgacgccgaaaccctaaccctaaccgcccacccggagctctccttcgaccacccgtac
cctccgacgaagctcatgttccacccttcctctgtccagaagtccttcgacgtcctcgcc
tcctccggcgactacctccgcctctgggaggtccgcgacacctccatcgagccgatctcc
gtcctcaacaacagcaagaccagcgagttctgcgccccgctgacgtcattcgactggaac
gacgtcgagccgaagaggatcggcacctccagcatcgacacgacctgcaccgtctgggac
atcgagaaaggcgtcgttgagacgcagctcattgcgcacgacaaggaggtctacgacctc
gcctggggagaggctagggttttcgcctccgtctccgccgacggatctgtcagaatcttc
gatttgagggacaaggaacactccacgatcatctacgagagtccgcagcccgatacgccc
ttgcttaggcttgcttggaacaagcaggacttgaggtatatggcgacgattctcatggac
agcaataaagttgtgatcttggatattcggtcgcccacgacgccggtggcagagctggag
aggcaccgagcgagtgtcaatgctatcgcttgggctccgcagagttacagacacatttgc
tccgccggggacgatactcaggccctgatttgggagcttcccacggtggccggacccagt
gggattgatcctatgtcaatgtactccgccggcgccgagatcaatcagctccagtggtct
gccgcgcagcccgattggatctccatcgcctttgctaacaaaatgcagcttttaaaagtt
taa
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integrated database retrieval system
