Morus notabilis: 21386889
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Entry
21386889 CDS
T07292
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21386889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21386889
Spliceosome [BR:
mnt03041
]
Complex A
U1 snRNP components
U1 related factors
21386889
Complex B
21386889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
21386889
NCBI-ProteinID:
XP_024020936
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MANNPQISGVQSIRPPIVGSMDPPQSLPPMSFQYRPAVPAQQFIPVTTQPFQPIGRGVPP
MNALPPAPPQFQQPFYSQPTQQFPPRAQDMLPLQTIPLPVALPNNHPLPIAHPQPSVQTP
SNFTPGIGGPGVSFSSSYTFAPSYGQIRRSFNDPTSVIAQQQTIENPAMTNSVAPVTSVQ
PDLSAEALSDWIEHMSSNGKKYYYNRRTRLSSWEKPVELMTPTEKADATTNWKEFTSPDG
KKYYYNKVTKESKWVMPEELKLAREQVAKASHKETQQETSCSVPDSVSSPTVNADASPKA
LGITSSPVSVEPVAAVVEPQGIEVSRSSSSPHVASAIKVNTVEDPTPSNVVSTSDTDTGS
IGTATNVATEKMNNSNNAAQDTINSSDGVSTHHKEEASNGLIGEKANDIAPEDIVVDREP
LVYANKLDAKNAFMTLMESANIGSDWTWDRAMRVIINDKRYGALKTLGERKHAFNEFLGQ
RKKQEAEERRIRQKKAREEFKRMLEESAELTSSIRWSKAESLFEKDERFRAVERDRDRKD
LFDNYIEELKKKERAKEQEERKRKIIEYRQFLESCDFIKASSQWRKVQDRLEADERCYCL
EKIDRLEHFQEYLNDLEREEEEQRKIQKEELRKAERKNRDEFRKLMEDHVAAGTLTAKTH
WRDYCVKVKELPEYQAVASNTSGSTSKDLFEDVVEELQKQYHDDKSRVKDAVKLGKITLS
STWTLDDFKNAITNDIGSPPVRDVNLKLVFDELLERVREKEEKEAKKRKRLVDDFSYLLS
SIKEINASSEWEDCKSLFDKSHEYSSIGLESLCQQIFEKYVMQLKEQAKEREQKRKEEKA
RQEKEREEGDRSKVKQRKEKEGGRMKEKEEHLEKEDGMDNKTADLNESRASKDEKRSVKE
SNRRHRKRHHSSEDYADENETDQFKKSHGPSSEHKKSRRHEESDHESRHKRHRRGHRQGS
RRHGDHEELEDGEFGDGKVDSQSFPS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacccccaaatttcaggtgtacagtctattcggcctcctatagttggttcc
atggatcctcctcaaagtctgcctccaatgtcttttcaataccggcctgctgttccggca
caacagttcattcctgtgactactcagccttttcagccgatcgggcgaggtgtcccgccg
atgaatgcattgcctcctgccccacctcaatttcagcagcccttttattctcaaccgacg
cagcagtttcctccaagagctcaagatatgctgccgctgcagacgattccattgccggtt
gcacttccaaacaaccatcccttgcccattgcccatcctcagcccagtgttcaaactcca
agtaacttcacgcctggtataggtggccctggagtatcgttctcgtcatcatatactttt
gctccttcctatggtcaaatacgaagaagttttaatgacccaacctctgtcatagctcag
cagcagaccatcgaaaacccagcgatgacaaattccgttgctcctgtgacaagtgttcag
cctgacctcagtgcagaggccctatcggattggatagaacatatgtcttctaatggaaaa
aaatactattacaatcggaggacaagattatcaagttgggagaagcctgtggaattgatg
acacccactgagaaagcggatgcaacaactaactggaaggaatttactagtcctgatgga
aaaaagtattactataataaagtcactaaagaatcgaaatgggtgatgcctgaggaactg
aagttggctcgtgagcaagtagcaaaagcctctcataaggaaacacagcaggaaacatct
tgctctgtcccagattctgtttcttcgcccacggtcaatgcagatgcatctcccaaagct
ctgggaataacatcaagccctgtttcggtggaacctgttgcggctgttgttgaaccacaa
ggtattgaggtttcaagatcatcttcctcgcctcatgtagcttctgctataaaagtaaac
acagttgaagatcctacaccttcaaatgttgtctcaacatccgacactgatactggaagt
atagggactgccaccaatgtagccacagagaaaatgaataattcaaataatgcagctcag
gatacaattaattcttcagatggagtttctacacaccataaagaggaagcttcaaatggt
ttaataggggagaaagcaaatgatattgccccagaagatatagtggtcgaccgtgaaccc
ttagtttatgcaaataagctggatgcaaaaaatgcatttatgacactgatggagtctgct
aacattggctctgactggacttgggatcgggctatgagagtaataattaatgacaaaaga
tacggtgctctgaaaacacttggagagcggaagcatgctttcaatgagtttttgggccaa
aggaaaaaacaggaagcagaagagagacgtattaggcagaaaaaagcacgggaagaattc
aaaagaatgttggaagaatccgcagagttgacatcatctataagatggagcaaagcagag
agcttatttgagaaagatgagcgattcagagctgttgaacgagatagagaccgcaaggat
ctgtttgataactatattgaagaactcaaaaagaaggaacgagcaaaggaacaggaggaa
cgcaagcgcaaaataattgagtaccggcagtttctggagtcttgtgactttatcaaggca
agcagccagtggcgaaaagttcaagaccgcttagaggctgacgagagatgttattgtctt
gaaaagattgaccgcttggaacattttcaggaatatctaaatgatctagagagagaagag
gaggagcagaggaagatacagaaggaggaattaagaaaggcagagcgtaaaaatcgtgat
gagttccgcaaactgatggaagatcatgttgctgcaggcactcttactgccaaaactcac
tggcgtgattattgcgtgaaggttaaagagttgcccgaatatcaagcagttgcatcaaac
acctctggttcaacttcaaaagatttgtttgaagacgttgttgaggagcttcagaaacaa
tatcatgatgataaatccagagtaaaagatgcagtcaagttgggaaagatcacgttgtca
tcaacctggacattggatgacttcaaaaatgcgattacaaatgatattggctctccacca
gtacgtgacgtcaatttaaagctagtatttgatgagttacttgaacgagtgagggagaag
gaggagaaagaagctaaaaagcgtaaacgtcttgtggatgatttctcttacctgctttct
tctatcaaggagataaatgcatcttctgagtgggaagactgcaaatcgctctttgacaag
agtcacgagtacagttcgattggtttagagagcctctgtcagcagatatttgagaaatat
gtgatgcaacttaaagagcaggcgaaagagagagagcagaaaagaaaggaggaaaaggca
aggcaggaaaaggagagagaggagggagacagaagcaaggtcaagcaaagaaaggaaaaa
gagggaggacgcatgaaagaaaaggaggagcacttagagaaagaagatggaatggacaat
aaaactgctgatttaaatgaaagtcgtgctagcaaagatgagaaaaggtcagtgaaagaa
agtaataggagacataggaagaggcatcacagttctgaggattatgcagatgaaaacgag
accgatcagtttaagaaatcccatggacctagtagcgaacacaagaaatcaagacggcac
gaagagtcagatcatgaaagcagacacaaaagacataggagaggtcatcggcagggttct
cgtagacatggtgatcacgaggagcttgaagacggtgaatttggtgatggcaaggtggat
tcacagtcatttccatcctag
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