Morus notabilis: 21388034
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Entry
21388034 CDS
T07292
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21388034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21388034
03009 Ribosome biogenesis [BR:
mnt03009
]
21388034
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
21388034
Spliceosome [BR:
mnt03041
]
Complex A
U1 snRNP components
U1 related factors
21388034
Complex B
21388034
Ribosome biogenesis [BR:
mnt03009
]
Eukaryotic type
Pre-60S particles
Helicases
21388034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
21388034
NCBI-ProteinID:
XP_010106662
UniProt:
W9RUL7
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSDSGFGGSVRSSSSSRRDYDGGESPKKFDVDGLTPFEKNFYV
ESPSVASMSEREVEEYRQRREITVEGRDVPKPVKNFRDVGFPDYVLQEISRAGFVEPTPI
QAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELA
VQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLR
RVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV
IIGSPDLKANHAIRQHVDIISENQKYNKLVRLLEDIMDGSRILIFMDTKKGCDQITRQLR
MDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL
EDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLITILEEAGQKVSPELAAMGRGAPPPP
SGYGGFRDRGRGYGGSRPWS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgaccccacttcctaccgtgaccggagaagtgac
tcgggtttcggtggctcggttcggtcgtcgtcgtcgagccggagagactacgacggggga
gaatcgccgaaaaagtttgacgtggatgggttgactccttttgagaagaacttctatgtg
gaatcaccctcagtggcttcaatgtcggagagagaagttgaggaatatcgccaaaggagg
gaaatcactgtcgaaggccgtgatgtcccaaaacctgtcaagaattttcgcgacgttggc
tttccagattatgttttgcaagagatatcaagagctgggtttgttgagcctacgcccatt
caagctcaaggatggccaatggctctcaaaggtcgggatctcatcggcattgcggaaaca
ggctcaggaaagactcttgcttatctcttgccggcgatagtccatgtcaatgcccagcca
attctagctcctggagatggtccaattgtgttagtcttagctccaactcgtgaacttgcc
gttcaaatacaacaagagtctaccaagtttggtgcatcttcaaagataaaaagtacgtgc
atatatggtggggttccaaagggacctcaggttcgtgacctccagaaaggggttgagatt
gtaattgctacacctggtaggttgattgatatgatggagtcacatcatacaaacttgcga
agggtcacgtatcttgtcttagatgaagctgatcggatgctggacatgggtttcgatcct
cagatacgaaaaattgtttctcagattcgcccagaccgtcaaacattgtactggagtgct
acttggccaaaggaggttgaacaactggcaaggcagttcctctataacccatacaaagtg
ataatagggtctccagacttgaaagcgaatcatgcgattcgccagcatgttgacattatt
tctgaaaatcagaaatataacaaattagtgaggttgctggaagatattatggatggcagc
aggattctaatattcatggataccaagaaaggatgtgatcagatcacccgacaacttcga
atggatggttggcctgccctctcgattcatggagacaaaagtcaagcagaaagggattgg
gtgctctctgagtttaaagctggcaagagcccaataatgacggcaacagatgtcgcagct
cgtggtctagacgtgaaggatgtgaaatatgttataaactatgactttccgggatctctg
gaggactatgttcaccgtatcggtcgaactggacgggcaggggctaaaggaacagcatac
actttcttcacagctgccaatgccagatttgcaaaagatcttattaccattcttgaggaa
gctggacagaaggtcagtcccgaattggcagcaatggggcgcggtgcacctcctcctcct
tcaggttatgggggttttcgagatcgaggcagaggttatggtggcagtcgtccgtggagc
taa
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