Morus notabilis: 21389166
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Entry
21389166 CDS
T07292
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
mnt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21389166
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
21389166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21389166
04121 Ubiquitin system [BR:
mnt04121
]
21389166
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21389166
Enzymes [BR:
mnt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
21389166
Spliceosome [BR:
mnt03041
]
Complex B
Other components
Prp19 complex
21389166
Complex C
Prp19-CDC5 complex
21389166
Ubiquitin system [BR:
mnt04121
]
Ubiquitin ligases (E3)
U-box type E3
21389166
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
21389166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Aladin
U-box
Beta-prop_DCAF12
RMC1_N
Beta-prop_DCAF4
WD40_like
Beta-prop_VPS8
Beta-prop_ACSF4
zf-Nse
Beta-prop_RSE1_2nd
PAS_11
V_ATPase_I_N
WDR54
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
21389166
NCBI-ProteinID:
XP_024032190
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MNCAISGEVPEEPVVSAKSGLLFEKRLIERHISDYGKCPITGEPLTMDDLVPIKTGKIVR
PRPVQAASIPGMLGMFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQVERHVPMPASAPIVVNAVGNGRTAAVDGVGPGGNNIRPGISAGVFEELT
ECNAALSQQRKKRQIPSTLAPVDDLERYTQISSHPLHKTSKPGIVSIDIHHEKDIIATGG
IDTNAVIFDRSSGEILSTLNGHSKKVTSVKFVAPDDLFLTGSADKTVRIWQGSDNGNYIC
NHVLRDHNAEVQAVTVHATNNYFVTASLDKTWCFYELSSGLCLTQVEDTSGTEGYTSAAF
HPDGLILGTGTSEALVKIWDVKTQTNVAKFDGHVGAVTAISFSENGYFLATAASDGVKLW
DLRKLRNFRTFAPYDPETPTNSVEFDHSGSYLALAGSDIRVYQVANVKSEWNCIKTFPDL
SGTGKVTSVKFGPDAKYLAVGSMDRNLRIFGLPGDNDVMES
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgcaatttccggtgaggtgccggaggagcctgtcgtctccgcgaagtctgga
ttgctcttcgagaagcgtttaatcgagagacacatatcggattatggaaaatgcccaata
acgggtgaaccactcacaatggacgaccttgttccaatcaaaacaggcaagatagtgcgg
ccaagacctgtgcaagctgctagcatccctggcatgcttgggatgttccaaactgaatgg
gatagtttgatgctatccaattttgcattggagcaacagctacacactgcaagacaagag
ctaagtcatgctctataccagcatgatgctgcttgccgtgtgattgcaaggctgaagaaa
gaaagagacgaagcacgatcactacttgctcaggttgagagacatgtaccaatgccagca
tcagcgccgattgtagtaaatgctgttggcaatgggagaacagctgctgttgatggagtg
ggccctggtggaaacaatatacgtcctggaatatctgctggtgtatttgaagagctcacc
gaatgcaatgctgctctttcacagcagcggaaaaaacggcagataccctcaacattggct
cctgttgatgatttagagaggtatacccagatatctagtcatccgcttcacaaaactagc
aaaccaggcattgtgtctattgatatacatcacgaaaaggacattattgcaactggtggc
attgatacaaatgctgtaatttttgaccgctcatctggagaaatcctatctactcttaat
ggtcactcaaagaaggttaccagtgtaaaatttgtggctccggatgaccttttcttgact
gggtcagcagataagacagtgcgtatatggcaaggatctgataatgggaactatatttgc
aaccacgttctgagagatcataatgctgaggtgcaagctgttacggtccatgccacaaat
aactactttgtgactgcttctcttgataaaacatggtgcttttatgagctttcttctgga
ttgtgtcttacacaggttgaagacacttcaggaactgagggctacacgtctgcggcattt
catcccgatggtctcatccttggaacaggcacctccgaggcacttgttaaaatttgggat
gtgaaaactcagacaaacgttgccaaatttgatggacatgttggagcagtaactgctata
tctttctcggaaaatggttacttccttgcgactgcagctagtgatggtgtaaagctttgg
gatctgcgcaaattgaggaacttcaggacatttgctccttatgatccagagacgccaaca
aattctgttgagtttgaccatagtggtagttaccttgcacttgcgggttctgatataagg
gtttaccaggttgctaatgtgaaatcagaatggaactgtatcaaaactttccctgatttg
tcgggcacaggtaaagttacttcagtgaaatttggtccggatgcaaagtaccttgcagtg
ggatcaatggacagaaaccttcgcattttcggcctacctggagataatgatgtaatggag
tcttga
DBGET
integrated database retrieval system
