Morus notabilis: 21389711
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Entry
21389711 CDS
T07292
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mnt
Morus notabilis
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21389711
03041 Spliceosome [BR:
mnt03041
]
21389711
03036 Chromosome and associated proteins [BR:
mnt03036
]
21389711
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
21389711
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
21389711
mRNA cycle factors
Common to processing body (P body) and stress granule
21389711
Spliceosome [BR:
mnt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
21389711
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
21389711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7029
Motif
Other DBs
NCBI-GeneID:
21389711
NCBI-ProteinID:
XP_010093725
UniProt:
W9RGN0
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MTMSWSDDVTGSTQSATRVVPYVPPHLRNSVVNNGAHSFDNGNSYGSYSTESTQHGFRSN
RPGSAGSSRSSRGRGGRRGQWRGRGRKSLGSSRSLSQEIFEVCEKFDDLEVSEEDGNGGG
GGGGGGINFDAYEDIPVEANGTDIPTAANTFVEICLGERLSENIKRCKYVRPTPIQRHAI
PIAVAGRDLMACAQTGSGKTAAFCFPIISGIIKSRSPRFGGQTTGVCFPSALILTPTREL
ASQIHDEAKKFAYQTGVKIVVAYGGASISHQFRNLEKGVDILVATPGRLVDMIERGRISL
RLIKYLTLDEADRMLDMGFEPQIRKIVERMDMPKPGVRQTMLFSATFPSEIQRLASDFLS
NYVFLAVGRVGSSTDLIAQKVDYVEDMDKRHYLMHILHDQKVNGTCGKHALTLVFVETKK
RADALEYWLSVNGFPAIAIHGDKVQMERERALKSFKSGATPIMVATDVASRGLDIPNVAH
VINFDLPRDIDDYVHRIGRTGRAGKSGIATAFFSEKNLPLAKVLVELMNESNQEIPDWLH
QYAETSISSSGGQRHGSSKFAAYDYRSTTSGNENYYYSSSYGGADSFDPNVASPCDVSGA
APSSSQHHLSPNAEPYAAGQYAYGGGYETVVATGWD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtcttggtccgacgacgtcaccgggtcgactcagtccgcgactcgcgtggtt
ccttacgtccctccccacctcaggaacagcgtcgtcaacaatggcgcgcactcgttcgac
aacgggaactcgtacggttcgtactcgaccgagtcgactcagcacggtttccgctcgaac
cgtccgggctcggccggttcgagccgcagcagtcgaggccgcggtggccgacgtggccag
tggcgcggccgcggccgaaaatctttgggatcgagccggagccttagccaagaaatattc
gaggtttgcgagaagttcgacgacctagaagtttccgaggaggacggaaatggcggcggc
ggcggaggtggaggaggaatcaatttcgacgcgtacgaggatattccggtggaggcgaac
ggtacggacattcctacggcggcgaacacgttcgtggagatttgtttgggggagcggttg
agcgaaaacatcaagaggtgcaagtatgtgaggcccacgcctattcagcgccacgccatt
ccgatcgccgtcgccggccgtgatctcatggcctgcgcgcagaccggttccggcaaaacg
gcggcgttttgcttcccgatcatcagtgggattatcaagagccgttcgccccgtttcggt
ggtcagacgacgggcgtgtgctttcccagcgctctcattctcactccgactcgagagttg
gctagtcagattcatgacgaggcaaagaagtttgcttatcaaactggggtgaaaattgtt
gttgcttatggcggggcgtcaatttctcatcagtttcggaatttggaaaaaggtgtagat
atcctagttgcaactcccggacgcttagttgacatgattgagagaggaagaatttcactg
agattgataaaatatttgaccctagatgaggctgataggatgttggacatgggttttgag
ccccagatcaggaagattgttgagagaatggacatgcccaagccaggagtaaggcaaaca
atgctgtttagtgccacgttcccaagtgagatacagaggctggcatcggatttcctttca
aactacgtatttctggctgttggcagggttggttcaagcactgatcttattgcgcagaag
gttgactatgttgaggatatggataaaagacactatctaatgcatattcttcatgaccaa
aaggttaatggaacctgtggaaagcatgctttgaccctggtttttgtcgagacaaagaag
agagcagatgccttggaatactggctgtctgtgaatggttttccagcaatcgcgatacat
ggagataaagttcaaatggagagagaacgagctctgaaatctttcaaaagcggtgctact
ccaattatggtggccacagacgttgcttcacgtggtttggacatccctaatgttgcgcat
gtcattaatttcgacctgccaagagacatagatgactatgttcatcggataggaaggaca
ggacgtgctggtaaatctggtattgcaactgcttttttcagcgagaagaatctcccactg
gcaaaggtgcttgtcgaactcatgaatgaatccaatcaggagattcctgactggcttcac
caatatgctgagacatcgatttccagtagcgggggccaacgccatgggagcagcaagttt
gccgcctatgactaccgaagtaccacatcagggaacgaaaactattactattctagcagt
tatggtggtgcagattcttttgatcctaatgttgcttctccatgtgatgtttcgggtgcc
gctcctagtagcagtcagcatcatctctctcccaatgcagagccatatgctgctggtcaa
tatgcatacgggggaggctatgaaactgttgttgccactggctgggactag
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