Morus notabilis: 21390174
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Entry
21390174 CDS
T07292
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21390174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21390174
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21390174
Spliceosome [BR:
mnt03041
]
Complex C
Other components
Step II factors
21390174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
AAA_22
DEAD
AAA_19
ABC_tran
nSTAND_NTPase5
nSTAND3
AAA_30
SLFN-g3_helicase
AAA_16
AAA_23
AAA_29
FtsK_SpoIIIE
NB-ARC
T2SSE
ATPase_2
DAP3
Cas3-like_C_2
AAA_33
nSTAND6
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
21390174
NCBI-ProteinID:
XP_024025730
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MANLPIVQFEEKIIKTVEQNPVVVIIGETGSGKSTQLSQMLRRSGYSKSGIIGVPQPRRV
AAVSVARRVAQELGVRLGEEVGYAIRFEDRTSEKTCIKYLTDGVLLRESLANPMLNQYSV
IILDEAHERSLNTDILLGLVKHLITIKKSNLKILITSATLDGEKVSKFFSDCPVLNVPGK
LYPVEILYSKERPKSYHESALKKALDIHVREPEGDVLIFMTGQDDIEKLVSKLEDRIRSL
EEGSCMDAIILPLHGSLPPEMQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGY
VKQRQYNPSTGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSSVYNDEFLDVTVPE
IQRCSLAGSVLYLKSLDLSDIDILKFDFLDPPSSESLEDALRQLYLIDAIDENGQITSIG
RTMAELPLEPSLSRTLMEANEYGCLSQALTVAAMLSAETALLPGRSKDTEKKRKQNNLDL
PDGSGWGDHIQLLQIYECWHQTDYNIDWCKVNGLQVRGMTFVKDVRKQLCQIMEKIAKGP
LDVRRSRRWRENQQDYYHLRKALCVGYANQLAERMIHHNGYRTLGFKAQTVQVHPSSALK
PDEEGKLADYILYHELVATTRPYLRNLCSVDIKWATPIINKINKVNVNKLSGGVAHVDDG
KLSDLPKKDAAAGAPDDHENRIQAARERFLARKGKK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccttccaatcgtccaattcgaagagaaaatcatcaaaacagtggaacagaat
ccggtggtcgtaatcatcggagagacaggttcgggaaaaagcacgcagctttctcagatg
cttcgccggagtggctactctaaatctggaatcatcggcgtcccccagccccgccgcgtc
gccgccgtctccgtcgcgagacgtgttgcgcaggagcttggtgttcgtctcggggaagaa
gttggatacgccataagatttgaagatagaacttcggaaaaaacctgcattaaataccta
actgatggagttcttcttcgcgaaagcttggctaatccaatgcttaatcagtattcggtg
ataatacttgacgaagctcatgaaaggagtctcaacacggacatattgttgggacttgtg
aagcatttgattactattaaaaaatcaaatttaaagattcttatcacttcagcaacgctt
gatggtgaaaaggtttcgaagttcttttcggattgcccagtactgaatgtccccgggaag
ctgtacccagttgaaatattgtacagcaaagagcgccctaaaagctatcacgaatcagct
ttgaaaaaagctctggatatccatgttcgggaaccagaaggggatgtcctaatatttatg
accgggcaggatgatatagagaagttggtatcgaaattagaagatagaataagaagcctg
gaagaaggatcgtgtatggatgcgataatccttccccttcatggttctttgccacctgaa
atgcaggttcgtgtatttagtcctccacccccaaactgtaggagaataattgttgccacg
aacattgctgagacttccttgaccgtggatggtgttgtgtatgttattgattctggttat
gtgaagcaacggcagtacaacccatcaaccggaatgtactcccttgacgttgttcaaatt
agcaaagtacaagctaatcaacgtgcagggcgagctggaagaacacgtcctgggaagtgc
tatcgactatacccttcctccgtttacaatgatgaattcctggatgtaacagttcctgaa
atacagagatgttctcttgctggaagtgttctttatttgaaatctttggacctttcagat
attgatattttgaaatttgattttcttgatccaccttcctccgagtctttagaagatgct
ttaaggcaattatatctcattgacgctattgatgaaaatggacagatcacatcaattgga
cgaacaatggcagagctacctctagaaccatcactttcaagaaccttgatggaggcaaat
gaatatggttgcttatcccaggctttgactgttgcagctatgctatctgcggaaaccgca
ttgttacctggtcgaagcaaggatactgagaagaagaggaaacagaataatctggacctt
cccgatggttctggctggggagatcacattcagttgctacaaatctatgagtgctggcat
caaaccgactataatattgattggtgcaaggtcaatggcttgcaggtgagagggatgact
tttgttaaggatgtccggaaacagttgtgccagataatggagaaaattgcaaagggacca
ctagacgtacggagaagccgaagatggagagagaaccaacaggattattaccatttgagg
aaagctttgtgtgtaggttatgcaaaccagcttgctgagagaatgatacatcacaatgga
tatcgaacattaggttttaaggctcaaacggtacaggtgcatccatcatctgctttgaaa
ccagacgaggaaggaaaactcgcagactacattttgtaccacgagctcgttgcaactaca
cgcccatacttgcgtaatttatgttctgttgatattaaatgggcgactcccatcataaac
aagatcaataaagtcaatgttaataaattaagtggtggcgtcgctcatgttgatgatggg
aaactctcagacttgccaaagaaagatgcagccgccggagctccagatgatcatgaaaat
agaatacaggcggctagggaacggtttcttgctcgtaaaggaaagaaataa
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