Morus notabilis: 21390529
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Entry
21390529 CDS
T07292
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
mnt
Morus notabilis
Pathway
mnt03030
DNA replication
mnt03420
Nucleotide excision repair
mnt03430
Mismatch repair
mnt03440
Homologous recombination
mnt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
21390529
03420 Nucleotide excision repair
21390529
03430 Mismatch repair
21390529
03440 Homologous recombination
21390529
03460 Fanconi anemia pathway
21390529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnt03000
]
21390529
03032 DNA replication proteins [BR:
mnt03032
]
21390529
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21390529
Transcription factors [BR:
mnt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
21390529
DNA replication proteins [BR:
mnt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
21390529
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
21390529
MMR (mismatch excision repair)
21390529
DSBR (double strand breaks repair)
HR (homologous recombination)
21390529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
21390529
NCBI-ProteinID:
XP_010105503
UniProt:
W9SG43
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MTMKAPSPDAISTIMANPSPDTTADMPEIVVQILDLTPKGSSRYMFTANDGKKKLKAILP
SQLTPQVISGEIQNLGLIRILDYSLNDIPSKSEKYLIVTKCETVSPALEMEFKSGVKSEE
TGILLKPKQEIEINSEVKRESSGNGIMLKPKQEMVTKSAAQIIHEQHGNMVPPARMAMTR
RVHPLVSLNPYQGSWMIKVRVTNKGTMRTYRNARGEGCVFNVELTDEDGTQIQATMFNEA
ARKFYDKFQLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEAAFVPETKF
NFVPIEMLGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVS
LWNDLATNVGQELLDIADQSPVVAIKSVKVGDFQGLSLSALSRSMVVVNPDTPEANKLKS
WYDSEGKGSPMASVGTGMSPSTRSGGRSMYSDRVFLSHITDNPSLGEDKPAFFSIRGYIS
SIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYILVVRVSDASGEAYIS
AFNEEAESIIGCSADELDKLRSQLGEENSYEMKLKEATWVPHLFRISVSQNEYNNEKRQR
LTVRAVAPVDFAAESKFLLEEISKMKAS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaaagctccgagcccagacgcgatctccaccataatggcgaacccctcgccg
gacaccaccgccgacatgccggagatcgttgtccagatcctcgatctcaccccgaagggt
agtagccgctacatgtttactgctaatgatgggaagaagaagctaaaagcaattctccca
tcacaactgactcctcaggttatctcaggagagattcagaatctgggtcttattcgcatc
cttgattattccctcaatgacattccaagcaagtcagagaaatatttaattgtgacaaag
tgtgaaacggtttcccctgcgcttgaaatggagtttaagagtggggtcaaaagtgaggaa
actggcattttattgaagccaaagcaagagattgagatcaatagtgaggtgaaaagagag
agctctggaaacgggatcatgttgaagccaaagcaagaaatggtcactaaatcagctgct
caaattattcatgagcagcatggaaatatggtgccaccagcacggatggcgatgactcgc
agagtgcatcctcttgtttctttgaacccttatcaaggaagttggatgataaaggttcgt
gttacaaataagggaaccatgcgtacatacagaaatgctagaggtgaaggttgtgtcttt
aatgtggagctgactgatgaagatgggacccaaattcaagcaacaatgtttaacgaagct
gcaaggaagttctatgacaaatttcaattggggaaggtttactatatctcaaagggaact
ctaaaagttgccaacaaacagtttaagacagtgcaaaatgattatgagatgactttgaat
gagaattctgaagtggaagaagcaagcaatgaagcagcttttgttcctgaaacaaaattc
aatttcgtcccaattgagatgttgggtccctatgttaatgggaaggaacttgttgatgtt
ataggagtcgttcaaagtgtatctcccactatgagcattagaagaaagagcaataatgaa
aatattccaaagcgtgatataacaattgctgatgaaagcaaaaagacagttgtggtttcg
ctgtggaatgatcttgcaacaaatgtaggccaggaattgctggatatcgctgaccaatct
cctgtggttgctattaagtccgttaaagttggagattttcaaggtttgtctttatcagca
ctaagtaggagcatggttgtggtaaatccagacacacctgaagctaacaagttgaaatct
tggtatgattctgaaggtaaaggttcgccaatggcctctgttggtactggtatgagccca
tcaacaaggagtggaggaaggtccatgtactctgacagagttttcttgtcccatataacc
gataacccatccttaggtgaagacaagcctgcgtttttcagcatcagaggatatataagt
tctatcaagcctgatcagacaatgtggtatcgggcttgcaaaacttgcaacaagaaagtc
acagaggctattggatctggttactggtgcgagggttgccagaagaatgatgaagagtgc
agtttaagatatatacttgtcgtaagagtgtcagatgcaagtggtgaagcttatatctct
gccttcaatgaagaagcggagagtattattgggtgctcagcagatgagcttgataaacta
agatcacagttgggagaggagaactcgtacgaaatgaaattgaaagaagcaacttgggtt
cctcatcttttccgaattagtgtttcgcagaacgagtacaacaatgagaagaggcaaaga
ctaacagtcagggctgttgctccggttgattttgctgctgaatcaaaattcttgctagag
gagatatcaaagatgaaagcttcctga
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