Morus notabilis: 21391621
Help
Entry
21391621 CDS
T07292
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC21391621
KO
K06100
symplekin
Organism
mnt
Morus notabilis
Pathway
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
21391621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21391621
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21391621
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
21391621
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
21391621
U7-dependent histone pre-mRNA processing factors
21391621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_EZ
HEAT_2
DUF3385
Motif
Other DBs
NCBI-GeneID:
21391621
NCBI-ProteinID:
XP_024020600
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MVGMMMTANSTEKLAGLVDSAKFATDIPSKLDRLRQLKHDLLHENPSSLSDLLPRLFELQ
SDRFGPVRKFATKIIGEIGLKYVEFLPEIVPVLITVLNDATPAVARQGINCGINLFRRTL
ERIAVQGLHSSELDGSLESSWEWMLKLKEKIYSIAFQPGGGGIRLLALKFVVAVILLYTP
DPNGSPEPPSHEENPVEFNISWVRGGHPVLNVGDLSIEASQSMGLLLDQLRLPTGNSLSN
STIIVLINSLSAIAKKRPAFYGRVLPVLLGLKLSSSVINGLHISGAHYALKNAFLTCLKC
THAGAAPWRDRLIGALREMNAGGSAKSSAEKVHHICKANGGLRDVQEDILVTKGEKPTVE
AYESVQNNFGKKRSGSQDKGDFVKDEDTPGKRIRATPNVSEESAKELNTTISVTYDDISS
TGPTTSEGDGDTGPVHQLVAMFGALVAQGEKAVGSLEILISSISADLLAEVVMVSMRNLP
LAHAIAEAGDEPVQNMSIVGSDSQVKYPPSFVANVLSLSSMFPKIASLVDTRQSVVNDKA
KPEVEKERSADNAVASVGIDEGAETLLLSAGVSDSSDISEMGKGCLAFPSDIHDAGNMES
EIPGLDSSVRNDNLSGQLAASSLVSMDVEDASQEKITSFVQKTSLHLLPSTSTERSDELS
PKATVSDVNSLVSSTATSVGLPHHFVLPKMSAPVVNLADDEKDNLQKSAFVRVVEAYKQT
TVTGGSQIRSSLLAHLGVEFPLELDSWKLIQTHILADYTNHEGHELTLRVLYRLFGEAEE
DHDFFSSRTATSVYEMFLLTVVETLRDSFPPSDKSLSRLLGEVPYLPDKVLKLLERMCSP
GNFDKAEKELQSGDRVTQGLSIVWSLILLRPPFRDACLKIALKSAVHHMEEVRMKAIRLV
ANKLYPLSSIAKRIEDFAKETLLSVINGETTETLDAEGPISELRKDSESEKPFNELPSMS
ANSKDVSSDTHQSCTSQSGSSLSVCEAQRCMSLYFALCTKKHSLFCEIFFTYKSASKEVK
QAVDRHIPILVRTMGSSSDLLEIISDPPVGSENLLMQVLHTLTDGTIPSQELIFTIKKLY
DSKLKDAEILIPILPFLSKDEVLLNFPQVVNLPIDKFRVALARILQGSPHSGPLLAPAEX
GIDPDRDGIPLKKVTDACNACFEQRQTFTQQVLAKVLNQLVEQIPLPILFMRTVLQAIGA
FPALVDFVMEILSRLVSKQIWKYPKLWVGFLKCAFLTKPQSFGVLLQLPPAQLENALNRT
PALKAPLTTHASQPDIRSSLPRSILVVLGIASDSQPQTSQPQAAEAITLDKEVVKEKSKE
SSGAS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaatgatgatgacggcgaactctacagaaaagctcgccggtcttgtggactcg
gccaagttcgccacagacattccgtcgaagcttgatcgcttgcgccaattgaagcatgat
ttgctacacgagaaccctagttcgctctccgacctccttcctcgtctctttgagcttcag
tccgataggttcggtccagttcgcaagttcgccaccaaaatcattggtgaaattggattg
aagtatgtggagttcttacctgaaattgtacctgtgttgattacggttttgaatgatgct
acaccggccgttgctcgacaaggcattaattgtggaattaatttgtttcgtcgtactctt
gagagaattgcagttcagggtctgcattctagtgaattggacggttctctcgagtcatcg
tgggaatggatgttgaagttgaaggagaaaatttactcgattgcttttcagcccggaggt
ggagggataaggttgctagccttgaagtttgttgtggcagtcattcttctttacacacct
gatcctaatggctcaccagagcctccctctcatgaagaaaacccggttgaatttaatata
tcttgggttcgtgggggtcatccggtactcaatgttggagatttgtcgattgaggccagt
caaagtatgggtttattgcttgatcaactcaggttgcctactgggaactctctcagtaac
tcaacaataattgtgcttattaatagcctttcagcaattgcaaagaagaggcctgcgttc
tatgggcgtgttctcccagttttacttggtctgaagctttcaagctctgtcatcaatggg
ctgcatatttccggggcacattatgctttaaaaaatgcattcctcacctgtttaaagtgc
acgcatgcgggtgctgcaccgtggcgcgatcgtttaattggggctttgagagagatgaat
gctggaggttcagcaaaaagttcagcagagaaagtccaccatatttgcaaggctaatgga
ggtctaagagatgtgcaagaagacattctagttactaagggtgagaaacccactgttgaa
gcatatgaatctgtgcaaaacaattttggaaagaaaaggtctggatcgcaggataagggt
gattttgtcaaggatgaggatacaccaggaaaacgaatcagagcaacacctaatgtctca
gaagaatcggctaaagaattaaatacaactatctctgttacatatgatgacatttcttca
actggtccaaccacttccgaaggagatggtgatactggtcctgtgcatcaacttgtagct
atgtttggtgccttggttgcccaaggcgaaaaagctgttggttctttagagattctcatt
tcaagtatctctgctgatttgctagctgaggtagtgatggttagtatgcgtaaccttcct
ctagctcatgctatagccgaagcaggtgatgaaccagtgcagaatatgagtatagttggc
agtgattctcaagttaaatatccgccgtcgtttgttgctaatgttctctcactttccagc
atgtttcctaagatagcttcactggtagatactcgtcaatcagtggtcaatgataaagcg
aaacctgaagtggagaaagaacgttcagcagataatgctgttgcttctgttggcattgat
gaaggagcagaaactctcttgttgtctgctggggtatcagattcttctgatatttctgaa
atgggcaaaggctgcttagcattcccttctgatatccatgatgctggcaatatggagagt
gaaatacctggacttgattcttctgttcgtaatgataatttgtcaggacagcttgctgct
tcgtcattggtctctatggacgtagaagatgccagtcaagagaaaattacaagttttgtt
caaaagacttcattgcatttacttccatcaacgtcaacggagaggtctgacgagctaagc
ccaaaagcaactgtttctgatgtcaatagcttggtttcctccacagcaacttcagttggg
ttgccccatcattttgtcctgccaaagatgtcagcacctgttgtcaaccttgctgatgac
gagaaggataatttgcagaaatcagcttttgttcgtgttgttgaggcatataagcaaaca
acagttactggaggttcacaaattcgatcttctttgcttgcacacttgggagttgagttt
cccttagagttagattcatggaagctgatacaaacacacatcttggcagattatacgaat
catgagggacacgagttgacattgcgcgtcctgtacaggttgtttggggaagcagaagag
gaccacgatttcttttcttccagaactgctacttctgtttacgagatgttccttttaact
gtggtggaaacgctaagagactcatttcctccctcagacaaatcattgagcagattgctt
ggagaggttccatatttaccagacaaagttttgaaattattggagcgcatgtgctcacct
ggaaactttgacaaggctgagaaagaattacaaagcggggaccgagtgacgcaaggtctg
agcatagtgtggagcctgattttactgaggcctccttttcgagatgcctgcttgaaaatt
gctttaaagagtgcggtacatcatatggaggaagtgcgcatgaaggctattcgtctggtc
gcaaacaagctttatcctttgtcatccattgcaaaacgaatagaagatttcgcaaaagaa
acattgctttctgtaataaacggtgaaacaacagaaacattggatgctgaaggaccaatt
tctgaacttaggaaggactctgagtccgaaaagccttttaatgaacttccatcaatgagt
gccaacagtaaagatgtgtcctcggatactcatcaatcatgtacttctcaaagtggatca
tccctttcagtctgtgaggcccagcggtgtatgtcactttattttgctttgtgcacaaag
aaacactccctcttttgcgaaattttttttacttataaaagtgcatcgaaggaagttaag
caggcagttgatcgccatatcccaatattagtccgcactatgggctcatcctcagatctt
cttgaaattatttcagatcctccagtaggaagcgagaacctcctaatgcaggttttgcat
acattgacagatggaacgattccttctcaagaattgatatttaccattaagaagttatat
gattcaaaattgaaggacgctgagatacttattccaatattaccatttctatcgaaggac
gaggttttgctgaactttccccaagttgtgaatcttcctatagataagttccgagtggca
ctcgcgcggatattacagggttcaccacattctggtccgctacttgctcctgctgaannt
gggattgaccctgatagagatggaattccattgaagaaggtcacagatgcatgcaacgct
tgctttgaacagcggcagacattcacccaacaagttcttgctaaagttttgaatcaattg
gttgagcaaattcctctgcctatactgttcatgcgtacagtattacaagctataggtgct
tttccagcactggtggattttgtgatggagattctctctcgacttgtaagcaaacagata
tggaaatatcccaagttgtgggtaggattcttgaagtgtgcgttcttgacaaagcctcaa
tcatttggtgtgttgcttcagctacctccagcacaactagaaaatgcattgaatagaaca
ccagctctgaaagcaccattaactacgcatgctagccagccagatattcgatcttcactt
ccaaggtcaatattggtagttttgggcattgcttcagattcccagccccaaacaagtcag
ccacaggctgcagaagcgatcaccttagataaggaggtggtcaaagaaaaatctaaagaa
tcatctggtgcttcttga
DBGET
integrated database retrieval system
