Morus notabilis: 21392209
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Entry
21392209 CDS
T07292
Name
(RefSeq) LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21392209
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21392209
Spliceosome [BR:
mnt03041
]
Complex C
Other components
Complex C specific factors
21392209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
Cas3-like_C_2
AAA_7
ResIII
T2SSE
SRP54
AAA_11
Motif
Other DBs
NCBI-GeneID:
21392209
NCBI-ProteinID:
XP_024024759
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MPQFWKPGTEKPRLLDDEEGGLLFFSSSHSSSSGFGYSSIERLRQRLPVFKYRTAILYLV
ETHATTIVVGETGSGKTTQIPQYLKEAGWANGGRVIACTQPRRLAVQAVASRVAEEMGVK
LGEEVGYTIRFEDITKNGVTMIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDI
LLGLLKKIQRRXPELRLIISSATIEAKSMSDFFNTSKKRRETEGGVRGPRMDPAILSVEG
RGFNVHIHYVEEPVSNYVQAAVSTVLSIHNQEPMGDILVFLTGQDDIDAAVQMLNEEVQS
RGRNSSGLLTLPLYSGLPRAEXELVFTSTPRGKRKVVISTNVAETSLTLEGIVYVVDSGF
SKQRFYDPISDIENLVVAPISKASARQRAGRAGRIRPGKCYRLYTEEYFINEMATEGIPE
IQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMVRALEVLYSLGVLDDDAKLTSPAGF
QVAEIPLDPMISKMILSSSQLGCSEEIITIAAILSIQSIWVFGRGAQKELDEAKLRFAAA
EGDHVTFPNVYKGFFQSGKSSQWCHKNFVNYHAMKKVIEIRDQLRRTAQRIGISLKSCEG
DMLAVRKAITAGFFANACHLEAYSHSGKYKTIRGSQEVYIHPSSVLFRVNPKWVIYHSLV
STYRQYARNVISIDPSWLKEVAPHFYQHQRPTSMLH
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccccagttttggaagccaggcaccgagaaaccccgccttctcgacgacgaggagggt
ggtcttctcttcttctcttcttctcactcttcttcctctggatttgggtattcgagtatc
gagaggctgagacagaggcttcccgtgttcaagtaccgcaccgccattctttatttggtg
gagacccatgccaccaccattgttgttggcgaaacgggcagtggcaaaaccactcagatt
cctcagtacctcaaagaagcaggttgggctaatggtgggcgtgttatagcttgtacacaa
ccaagaagattggctgttcaggcagttgcttcaagagtggctgaagaaatgggggtcaag
cttggagaggaagttggctacacaataagatttgaagatatcaccaaaaatggtgtaact
atgataaagtttctcacggatggggttttacttagggaaatgatggatgatcctctcttg
actaagtatagcgtcataatggtagatgaggctcatgaaagatctatctcaactgatatt
ttactaggtctcttgaaaaagatccaacgacgttgacccgagttacgtttgataatctcc
tctgccacaattgaagcaaagtccatgtctgattttttcaacaccagcaaaaagcgccgg
gaaacggaaggtggtgtccgaggaccaaggatggatcctgcaatcctatcggttgagggt
agaggatttaatgtacacattcattacgtggaagagcctgtatccaactatgttcaggct
gctgtttcaacagtattgtccattcataatcaggaaccaatgggagatattttggtgttt
cttactggacaagatgatattgatgctgccgtacaaatgcttaatgaagaagttcaaagc
cgtgggagaaactcttcaggattgcttactttgcctctctactctggtcttccacgtgct
gagtaggagcttgtgtttacttccactcctagagggaagaggaaagtagtgatatcaaca
aatgttgcagagacgtccttaactttggagggaattgtctatgttgttgatagtggcttc
tcaaagcaacggttctacgatcctatatcggatattgaaaatctcgtagtggcaccaata
tcgaaggcttctgctaggcaaagagctggtagggcaggaagaattcgcccagggaaatgt
tacaggctatacacagaagagtattttatcaatgaaatggccacagaggggattccagag
atccaacgatctaatcttgtttcctgtgtcattcagttaaaagccttgggaatagataat
atcttgggctttgattggccagcatctccatcacctgaagctatggttcgggcacttgaa
gtactttattcactcggagtcctggacgatgatgccaaacttacttctccggctggattc
caagttgcagagattccattagatcctatgatttcaaaaatgatcttgtcctcaagtcaa
cttggatgttcagaggagataataactattgcagccattctctccattcaatctatctgg
gtttttggaaggggagctcaaaaggaactggatgaggcaaagttgagatttgctgctgct
gagggtgaccatgtgaccttcccgaatgtttataaaggatttttccagtctggtaaatct
tcacagtggtgtcataagaactttgtgaactatcatgccatgaaaaaagtaattgaaatt
cgagatcaactcagaagaacggcacagagaataggcatttccttaaaatcctgtgaagga
gatatgctggcagtgagaaaggcaattactgctgggttttttgcaaatgcgtgtcattta
gaagcatacagccacagtgggaagtacaagaccataagaggttctcaagaagtctacatt
cacccttcatccgtgttgttcagagttaatcccaagtgggtaatataccattcgcttgta
tcaacttacagacaatacgcgaggaatgtgatttccatcgacccatcttggctaaaagag
gttgccccacatttttaccagcaccagcgtcccacttcaatgcttcactaa
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