Morus notabilis: 21395883
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Entry
21395883 CDS
T07292
Name
(RefSeq) cleavage stimulation factor subunit 50 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
mnt
Morus notabilis
Pathway
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
21395883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21395883
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
21395883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
LisH_CTF50
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
ASA1
CFAP251_N
Beta-prop_SCAP
Beta-prop_DCAF4
PAC11
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR41
IcmF-related_N
Motif
Other DBs
NCBI-GeneID:
21395883
NCBI-ProteinID:
XP_024020169
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MESSNLEQTLQDGKLFRHLNSLIVAHLRDNNLNQAASAVASATMTPLNVEVPANNLLELV
AKGLAVKKDEMLRGVSSTGLYDLGTSIPAVYGSVSAPLTAAAIDFSRAAQMKEEQGLYQL
SILWRILKAHQRVSQSMSQGIFQSTRCARFSLDGKYIATGSSDTSIKLFEVAKIKQMMLP
DARDGPVRTVIWTFYDHALPINDLDFHPQNTILISGAKDHTIKFFDFSKMTAKRAFRVIQ
DTHNVRSVSFHPSGDFLLAGTDHPIPHLYDVNTFQCYLSASIPEIGVNGAINQVRYSTTG
GMYVTASKDGAIRLWDGVNASCIRSIVGAHGTSEATSAIFTKDQRFILSCGKDSSVKLWE
VGTGRLVKQYLGATHTQLRCQAVFNHTEEFVLCIDEPNNEIVIWDALTAEKVARWPSNHI
GAPRWLEHSPVEAAFVSCGTDKSIRYWKEAL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagcaacttggagcagactctgcaggatgggaagctcttcagacacctcaat
tctctcatcgtcgctcatcttcgcgacaacaatctcaatcaagctgcgagtgcggtcgct
tctgcgacaatgacacccttgaatgttgaagtcccggctaataaccttcttgagctggtt
gccaagggtcttgcagtaaaaaaggatgagatgttgagaggggtttcttcaactggatta
tatgatttgggtacgtcaatacctgcggtgtacggttctgtttctgctcctcttaccgct
gctgctattgatttcagtcgagcagcccaaatgaaggaggaacagggattgtatcaatta
tcaattctgtggaggatactaaaggcgcatcaaagagtatcccaaagcatgagccaaggc
atctttcagagcacaagatgtgcaaggtttagtcttgatgggaagtacattgctactgga
agttctgatacgtctataaagctatttgaggttgcaaagataaagcaaatgatgctgcca
gatgcaagggatggtcctgtgcgaactgtgatatggacattttatgaccatgctctgcca
ataaatgacctggatttccatccacaaaacactattctaatatcgggagccaaagatcat
acaattaagttctttgacttttcgaagatgaccgcaaagagagcattcagagttatccag
gatacccacaatgtgcgctcggtttctttccacccttctggggatttccttttagctgga
actgatcatccaattcctcatttgtacgatgtcaatacttttcagtgttacctatcagcg
agtattccggagatcggtgttaatggagcaataaatcaggtcaggtattcaactacaggt
ggtatgtatgtcactgcttctaaagatggtgcgattcgtttatgggatggtgtaaatgcc
agttgcatacggtctatagttggtgcacatggaacatcagaggccactagtgcaatattt
acaaaagatcaaaggttcattctctcgtgtggaaaggattcctccgtgaagctatgggaa
gttggaactggaagattggtcaagcaatacctgggagctacgcatacacagttgcgctgt
caggctgttttcaatcatactgaagaatttgtactatgcatagatgagcctaacaacgag
attgttatatgggatgctttgacagcagagaaggttgcaaggtggccttccaaccatatc
ggcgctcctcgttggcttgagcactcaccagtagaggcagcatttgtttcctgtggaacc
gacaagtcaatccgttattggaaagaagcactctaa
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