Morus notabilis: 21396976
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Entry
21396976 CDS
T07292
Name
(RefSeq) polyadenylation and cleavage factor homolog 4 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mnt
Morus notabilis
Pathway
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
21396976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21396976
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21396976
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
21396976
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
21396976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_PCFS4
CID
Motif
Other DBs
NCBI-GeneID:
21396976
NCBI-ProteinID:
XP_024032992
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MEMESSRRPFDRSREPGLKKPRLTEEPERGPTANPNARTFAQRPIANQNPLVSRYRVADR
DSESNDLGRVGGGGGGGYQPQPPPHQELVSQYKAALAELTFNSKPIITSLTIIAGESVHA
AKAIAATVCANILEVPSEQKLPSLYLLDSIVKNIGGEYIKNFAARLPEVFCKAYKQVEPS
VHQSMRHLFGTWKGVFPLQTLRVIEKELDFAPAANGSSTGAATSRPETQSNRPLQNSIHV
NPKYLERQRLQQPNRAKELSSDVSGSIANSIEDAESMERATSIGTGRSWVDPSVKMHNLQ
RSTRGTTSEVIHEKNISVESPDYDYSSDLPRNSSLGIVRASGRIAEQGNEKVWHGGGSSF
AESVSGQRNSFNIKHGFPNYPGPKSISANTQLQSAQNISSRRSGAAASSSWKNSEEEEFT
WDDMNSRLTDHGASDISTNFRVDRSAYEDADKSGFEDHIHKPLSIRDYASRVNKEVSADT
FAVEQNRISSPWLSQESHSIDGLSRSGTSSFGFPTNSVPGSTGALTQQRFPPPTLRQRSP
SPTLSARRPHLQLQNLTEQDRAKAQSPAHPDSKVSQSLGQSTREVHNQYAQDSLPVLPSH
VRLNKMVKSQHHNMPPRHQYPFLQQVEDSTDSEPLGQIQKLPLPQASNSGPPATLGSSAP
DRLNALAVETSGDSSTSSLLAAVMKSGILSNSSITTSSLSNLNFQSSAQLPSQAGQPPLP
TGTHTNLGSKATSTSSISHSSHDGLSVSSKIFQKKTQSAPLPTGPPPSSSPLRSASENAS
SVANNTPDPISNLLSSLVAKGLISASKKESPQAIPPVVPTETQKKSPSITGTGSVPVSLV
SGSTVSSTRDDSSISEPTADSPVSLPESTKSTNLEIKNLIGFDFKPDESTKSTNLEIKNL
IGFDFKPDVVREFHPSVVSDLLDGFEHQCNMCGLQLKLKERLTRHLEWHNTKKLDANGPT
KASRMWYANPSDWINGVAGFSSGLESAKSVDKPGKTDKGESMVVADESQCVCVLCGEIFE
DFYCQERDEWMFKGAMHMIIPSATGETGSNGEGSRKGPIVHANCISECSLQDLGLVSRIK
TEMDV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagagctcgcgacggcctttcgacagatccagagaaccgggattgaagaag
ccccgattgaccgaagagccggagcgaggtccgaccgcgaatccgaacgccagaactttc
gcgcaaagaccgattgcgaatcagaatcccttggtctcgaggtatagagtggcggataga
gattcggagagcaacgatttgggccgtgtcggcggcggaggcggtggaggttatcagccg
cagccgccgccgcaccaggagctcgtgagccagtacaaggcggcgctggcggagctgacg
ttcaattcgaagccgatcatcacgagtttgacgataatcgccggcgagagcgtccacgca
gcgaaggcgatagccgccactgtttgcgccaacattctagaggtacctagtgagcaaaag
ctaccatcactttatcttttagacagtatcgtaaagaatatcggaggggagtacataaaa
aactttgctgccagattacctgaggtattctgcaaggcgtacaagcaggtggagccttca
gtacatcaaagcatgcggcatctttttggaacatggaagggagtgtttcctctccagaca
cttagggtcattgagaaagaacttgattttgctcctgcagcaaatggatcatctactgga
gctgcaacatctaggcctgaaacacaatcaaatcgtccactacagaatagcattcatgtg
aatcccaagtatttggaaaggcagcgtcttcagcagccaaatagggcaaaagaactttct
agcgatgtctctgggtctattgcaaactcaattgaggatgcagagagtatggagagagca
acaagtatcggtactggaagatcatgggttgatccgtctgttaaaatgcataatttgcag
cgttcaactagaggtactacaagtgaggttatccacgagaagaacatcagtgtagagtct
ccggactatgactatagctctgaccttccaaggaattccagcctggggattgtaagagct
agtgggaggattgcagaacaaggaaatgagaaagtttggcatggaggtggtagcagtttt
gcagaatcagtatctggtcaaagaaatagtttcaatatcaagcatggattcccaaattat
ccaggacctaaatctataagtgctaatactcagctgcagtcggcacaaaatatctcaagt
agaaggagtggtgctgctgctagcagcagttggaagaattctgaggaagaagaattcacg
tgggatgatatgaactctagattgacagaccatggtgcatctgatatttctactaacttt
agagtagatcgttcagcttatgaggatgcagacaaatccgggtttgaagatcacatccat
aaaccactaagcatacgtgattatgcatcaagggtcaataaagaagtttctgcagataca
tttgctgttgaacaaaaccggatatcatctccatggttgtcacaggaatcacattcaatt
gatggcttgtctcgttctgggacttcaagctttggcttcccgacaaattctgtaccaggg
tctactggagctctaactcaacagcggttcccccctccgacattgagacagcgctcaccc
tcacctactttatcagcacgccgtcctcatcttcaattgcaaaatttaaccgagcaagac
cgtgcaaaagcccagtcccctgctcatcctgattctaaagtatcccaatcgttggggcag
tcgaccagggaggtgcataaccagtatgctcaggactctttgcctgttctaccttcccat
gttcgactgaacaagatggttaaatcacaacaccataatatgccgccaaggcaccagtat
ccttttctgcagcaagtagaagactctacagactctgaacccttgggtcaaattcagaaa
ctccctctacctcaagcttcaaattctggacctccagcgacactaggtagttctgcacca
gaccgcttgaatgctcttgccgtagaaacttcgggagactcgagcacaagtagtctattg
gctgctgttatgaagtctggaattctttctaacagttcaattaccactagtagcctatcc
aacctgaactttcagagctctgcacaattgccatcacaggcaggtcagcctcccttgcca
actggtactcatacaaacctagggtcaaaggctacatcaacatcttcaataagtcattct
tcccatgatggcttgtcagtgtcctcaaagatattccaaaagaaaacacagtcggcacct
ctcccaactggtccaccaccttcatcgtctcctttaaggagtgcatcggaaaatgcttca
agcgttgcgaataacacccctgatccaatttcaaaccttctgagctctttagtggcgaag
ggtttgatatctgcatcgaagaaagagtcaccccaggcaattccaccagtggttcctact
gaaactcaaaagaagagcccaagcattactggcaccggttctgtgccagtgtctttagtt
tcaggttccaccgtctcatctaccagagatgattcatctatctcagaacctactgctgat
agccccgtctcgttgcctgagtcaaccaagtcaaccaacttggaaataaagaacctcata
ggttttgattttaaaccagatgagtcaaccaagtcaaccaacttggaaataaagaacctc
ataggctttgactttaaaccagatgtggtccgggaatttcatccatctgttgttagtgat
ctcctcgatggatttgaacaccaatgtaacatgtgtggtcttcaacttaaacttaaagaa
cggttgactagacacttggagtggcataatacaaaaaagctagatgctaatggtcctacc
aaggcatcaaggatgtggtatgctaacccatcagactggattaatggagtagcaggcttt
tcatcgggattggagtctgcaaaatcagtggacaaacctggcaagacggacaagggtgag
tcgatggttgttgcagatgagagtcaatgcgtatgtgtcctttgtggtgagatttttgaa
gatttctattgtcaagaaagggatgagtggatgttcaagggagcgatgcacatgatcatt
ccatcagcaactggtgagacaggaagtaacggcgagggctcacgaaagggtcccattgta
cacgcgaattgtatatcggaatgttcactccaagatctggggcttgtcagcaggattaag
acggaaatggatgtttaa
DBGET
integrated database retrieval system
