Morus notabilis: 21396987
Help
Entry
21396987 CDS
T07292
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mnt
Morus notabilis
Pathway
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
21396987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21396987
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21396987
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
21396987
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
21396987
U7-dependent histone pre-mRNA processing factors
21396987
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Mur_ligase_C
Motif
Other DBs
NCBI-GeneID:
21396987
NCBI-ProteinID:
XP_010112439
UniProt:
W9SAX4
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MASTTGQPASLKRRDSLAAREEDKLVITPLGAGNEVGRSCVYMSFKSKTVLFDCGIHPAY
SGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLL
TDYVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMV
DIAGVRVLYTGDYSRDEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRNIREKRFTDVIH
STISQGGRVLIPVFALGRAQELLLILDEYWSNHPELQNIPIYYASPLAKRCLSVYETYTL
SMNDRIRNAKSNPFIFKHISPLKSIENFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKR
NACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQTSAFLEEL
RPPNIILVHGEANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKAIGKLAE
KTPEVGDIVSGLLVKKGFSYQIMAPDDLHVFSQLATANITQRITIPYSSAFSVIKHRLKQ
IYDSVESSTDEESGVPTLRVHDRVTVKHESDKHISLHWTSDPISDMVSDSVVALVLNINR
EVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGNGKIMINVDGNVAQLDKQS
GDVESENEGLKERVRTAFRRIQSAVKPIPLSSS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacgacaggacaaccggcgtctctgaagcgaagggattcgttggcggcgaga
gaggaggacaagctcgttattactcctttaggggctggcaatgaagttggccgctcttgt
gtctacatgtccttcaagtccaaaactgttttgtttgattgcggaattcatccagcttac
tcgggcatggctgctttgccctactttgatgagattgatccttctactgtcgacgtcctt
ctcattactcacttccatttggatcatgctgcatctcttccttattttctggaaaagacc
acattcaaaggtcgtgtcttcatgacttacgcaacaaaggctatctacaagttgctttta
acagattatgtaaaagtgagcaaagtttcagttgaagatatgttgtatgacgaacaggac
ataaatcggtccatggacaaaattgaggttattgatttccaccaaacagtggaagtgaat
ggaatccgattttggtgttacacagctggtcatgtccttggtgctgctatgtttatggtc
gacattgctggtgttcgagtcctctataccggagattattcacgtgacgaagaccgacat
ctccgtgctgcagagaccccacagttttcccctgatgtatgcataattgaatccacttat
ggtgtccagcatcatcaacctcgaaatatccgagagaagcggtttactgatgtcatacac
tcaaccatttctcagggaggtcgtgtcctaattcctgtatttgctcttggtcgtgcccaa
gaactcctcctcatccttgatgagtactggtcaaaccatcctgagctccagaacattcca
atatattatgcttccccgcttgcaaaacgatgcttgtctgtttacgagacatacacgcta
tcaatgaatgacaggatcagaaatgcaaaatcgaatcccttcatcttcaagcacatatct
ccacttaagagcattgagaattttaaagacgtgggcccgtcagtagtcatggccagcccc
ggtgggcttcagagtgggctgtcgaggcaactctttgatatgtggtgctctgataagaga
aacgcctgcgttattccaggttacgtggttgaagggactcttgctaaaacaatcatcaat
gaaccaaaagaagtcactctcatgaatggactgactgctcctctcaacatgcaagtccat
tatatctcattctccgcccatgcggactctgctcaaacaagtgcattcttggaagagttg
aggcctcctaacataattcttgttcatggagaagcaaatgaaatggggaggctcaaacag
aagcttatgactcaattcgcggaccgtaacactaaaattctcaccccaaaaaattgccaa
tcagttgaaatgtatttcaactcgcagaaaatggccaaagctattgggaagctggctgag
aagaccccagaagttggtgatattgtcagtggtctactagtaaagaaagggttcagctat
cagataatggctcccgacgatctccatgtcttctcgcagctagcaacagcgaacattact
cagagaataactatcccgtattccagtgccttcagcgtgataaagcaccggcttaagcag
atatacgacagtgtagaatcttcaacagatgaggaatctggcgtgccaacactgcgagtg
catgatcgcgtgacggtgaagcacgagtcagacaaacacatttcacttcattggacatcg
gatcctattagtgacatggtatcagactccgttgtggctctggttttaaatatcaaccgt
gaagtccccaaagtagttgttgaatccgaggataccaaaactgaggaagataacgagaag
aaggcagagaaggtgatttacgcgcttctcgtatctctctttggagatgtgaagctccga
ggaaacggcaagataatgattaatgttgatgggaatgtggcacagcttgataagcagagt
ggggacgttgaaagcgagaatgagggtctcaaggaaagagtaaggacggcgtttcggcga
atacaaagcgctgtcaagccaatccctctctcctcatcttag
DBGET
integrated database retrieval system
