Morus notabilis: 21397417
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Entry
21397417 CDS
T07292
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21397417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21397417
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
21397417
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
21397417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
21397417
NCBI-ProteinID:
XP_024026328
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MLGLSLGEKQFIKGGIAQDLRSDGRKRLTYRPISVETGIIPQASGSARVRMGATEVIASV
KAELGRPSPLQPDKGKVAIYVDCSPTAEPTFEGRGGEELSTELSVALQRCLLGGKSGAGA
AIDLSSLVVIEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRANVASGASGD
GQPEVDISDEEFLQFDTSGVPVIVTLTKVGKHYIVDATAEEESQMSSAVSISVNRQGHIC
GLTKRGGAGLDPSIILDMISVAKHVSEQLINKLDSEIAAAEADEEES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttgggattatcgttgggagagaagcaattcataaagggtgggattgctcaggacctt
cgttctgatggtcggaaaagattaacttaccgccccatctctgtcgaaactggaatcatt
ccgcaggcaagtggttccgcgagggtcaggatgggtgccacagaggttattgccagtgtc
aaggctgagcttggaagaccaagtccactgcaaccagataaaggaaaggttgctatatat
gtagattgcagtccaacagcagaaccaacgtttgagggtagagggggtgaggagttgtca
acagaactgtcagtcgctttgcagcgttgtctcttgggtggtaaaagtggtgcaggtgct
gcaattgatctctcatctctagtagtgatagaaggaaaaatctgttgggatctctacatt
gatggccttgttgtcagttcagatgggaatcttctagatgcccttggtgcagctattaag
gctgctttgagcaatacaggcattccaagagctaatgttgcatcaggtgcctcaggcgat
gggcaacccgaggttgacataagtgatgaagaatttctgcagtttgacacatctggggtc
cctgtcattgtcacgttaacaaaggtgggcaagcactacattgtggacgctactgcagaa
gaggaatctcaaatgagctcggctgtttctatttctgtcaataggcaggggcacatatgc
ggtttgaccaaacgaggtggcgcaggcttagatccaagcatcatacttgacatgatatca
gtggcgaaacatgtcagcgagcagttaataaacaaattggattctgagatagctgctgct
gaagctgatgaagaagaatcatga
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