Morus notabilis: 21398595
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Entry
21398595 CDS
T07292
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mnt
Morus notabilis
Pathway
mnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
21398595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21398595
Enzymes [BR:
mnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
21398595
DNA repair and recombination proteins [BR:
mnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
21398595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
HeH
Motif
Other DBs
NCBI-GeneID:
21398595
NCBI-ProteinID:
XP_024025434
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNQIQSLQLGFKNLFKVAPGILRVSSSMRSKRNVSSSSNSLPTTSEDNRTGKKLKPLMGT
KPNQQKEPLLKERAVESSPVEIEGFKDDPEKIEKMTVQELRTTLRSIGVPAKGRKPELVS
ALKLFVDQKINGESSQIEEEQAFSISAKSVYEEDQVQNVSTVLEAQELKRSKRRLKQSGG
EGSAVGFNLKAVTTKQKLSIKSVGVSGGKVSQTETRTSSETISVKADYKSGMPLVETEPW
TVLAHKKPQKHWIPYNPRTMRPPPLSSDTKSVKLMSWNVNGLRALLKLEGFSALELAQRE
DFDVLCLQETKLQEKDVEKIACLIDGYPNNFWTCSSGKLGYSGTAIISRMKPLSVRYGLG
ISDHDGEGRLVTAEFDSFYLICGYVPNSGDGLRRLTYRITQWDPSLSSYMKELEKSKPVI
LTGDLNCAHQEIDIYDPAGNRRSAGFTDEERQSFEKNFLSNGFVDTFRRQHPGVVGYTYW
GYRHGARKTNKGWRLDYFLASESIADQVHDSYIVPDIHGSDHCPIGLVLNL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccaatcccttcaattagggtttaagaatctcttcaaagtggctcctggg
attttgagagtttcgagctcaatgaggtctaaacgaaacgtttcgagttcttcaaattcc
ctgccaacaacgtctgaggacaacagaacgggtaaaaagttgaaaccattaatgggtaca
aaaccaaatcaacagaaggagcctcttctcaaggaacgtgctgtagaaagttcccctgtg
gagattgaaggttttaaggatgacccagaaaaaatcgagaagatgacagtccaggaactt
agaacaacattgaggagtattggggtccctgctaaaggtcgtaaaccagaacttgtatcc
gccttgaagttgtttgtggaccagaagataaatggtgaaagttctcagatagaagaagag
caagcattctccatttctgctaaaagcgtatatgaagaagaccaagttcaaaatgtcagc
actgtcttggaggcccaagaacttaagaggagtaagagaaggttaaaacagtcgggaggt
gaagggagtgctgtcggattcaaccttaaagctgtcacaacaaaacagaagctttccata
aaatctgttggggtttcaggcggaaaggtctctcaaacagagactagaacatcttcagaa
actattagtgttaaagcagactataaatcgggaatgcccctggtggaaacggaaccttgg
acggttcttgcacacaagaagcctcagaaacattggattccgtataatcctagaaccatg
aggccccctcctctttctagtgatacaaagtctgtgaagcttatgtcttggaatgtaaat
ggtttgagagcattactaaagttagagggattctctgcacttgaactcgcccaaagggaa
gattttgatgtattatgcttgcaggagaccaaactgcaggagaaggatgtcgaaaagatt
gcttgtttgatagatggctatccgaataacttctggacctgtagttctggcaagcttggt
tattctggaactgcaattatttcccgaatgaaaccactttctgtcagatatggccttggc
atatcagatcatgatggcgagggacggctagtaacagctgaatttgattcattttactta
atttgtggatacgttcctaattctggagatggcttgagaagactgacatacaggattaca
caatgggatccatctctcagcagttacatgaaagagcttgaaaagtcgaagcctgtcatt
ttaactggtgacctgaattgtgctcatcaagagatagacatatatgacccagcaggaaat
agaagaagtgctggctttacggatgaagaacggcaatcatttgagaaaaacttcttatct
aacggatttgtggatacctttcgaaggcaacaccccggtgttgttggatatacttactgg
ggttataggcatggcgcacgcaaaactaataaagggtggcgtcttgactacttcctcgcc
tcagaatccatagctgaccaggttcacgattcatacattgtccctgatattcatggcagt
gatcattgtcctatcggtcttgtactcaacttgtag
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