Morus notabilis: 21399949
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Entry
21399949 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21399949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21399949
03012 Translation factors [BR:
mnt03012
]
21399949
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21399949
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21399949
Translation factors [BR:
mnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
21399949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
BEX
T2SSE
NACHT
AAA_19
Rad17
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
21399949
NCBI-ProteinID:
XP_024028397
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MSYRPNYRGGRGNSGGGRGTSVGRGGGRRGGGGEGGRGEQRWWDPVWRAERLRQKAAEVE
AMDENEWWGKIEQMKRGGEKEMIIKRNFSRADQQTLADMAYQLGLHFHAYNKGKTLVVSK
VPLPDYRADLDERHGSTQKEIRMTTEIERRVGNLLDRSQSRGGLSANSSSEASSQRGKQS
LADGDMTQPVPVLENDSTKEKLSLELKEKHDKMKASGSLKAMQSFREKLPAFKMKSEFLK
AVAENQVLVVSGETGCGKTTQLPQFILEAEISSLRGADCNIICTQPRRISAISVSARVSS
ERGESLGETVGYQIRLESKRSSQTRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGM
NEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTIHIPGFTHPVAELFLEDI
LEKTRYSIKSEFDNFEGNSRKRRRQKDTKKDPLTELFEEVNIDAQYGSYSTSTRKSLEAW
SGLQLDLGLVESTIEYICCHEGPGAILVFLTGWDDISKLLDKVKANRVLGDPSKFMVLPL
HGSMPTINQREIFDRPPPNQRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLA
CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPKMIHDAMLQYQLPEILRTPLQELCLQIK
SLQLGTVGSFLAKALQPPDPLAVQNAIELLKTIGALDDREELTPLGCHLCTLPLEPNIGK
MLLMGSIFQCLNPALIIAAALAHRDPFVLPIDRKEVADAAKRSFAGDSCSDHIALLKAFE
GWKEAKRSGKERAFCWENFLSPVTLQMMDDMRMQFLDLLSDIGFVDKSRGPTAYNQYSHD
LEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDIHPASVNAGVHLFPLPYMVYSEK
VKTTSIYIRDSTNISDYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKSVLELIRKLRGE
LDNLLNRKIEEPSFDISREGKAVVAAAIELLHSQNVRY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccggcccaactaccgaggaggccgcggaaactccggaggaggccgcggaacc
tccgtcggtcgcggcggaggccgccgtggcggtggcggagaaggagggcgcggggaacag
cgctggtgggacccggtgtggcgagcggagcggctcagacagaaagctgccgaggtagaa
gctatggatgagaatgaatggtggggtaagatagagcagatgaaaagaggaggagagaag
gagatgataatcaagcgcaactttagtcgagcagatcagcaaacactagctgacatggct
tatcaacttggccttcacttccatgcgtataacaagggcaagactcttgtagttagcaaa
gttccgttgccagattaccgggcagatcttgatgagcgtcatggttctacacagaaagag
attagaatgactacagaaattgaaaggcgagttggaaatctgttggatcgctcacagtca
cgaggagggctatctgctaatagttcttcggaggcatcttctcagcgagggaaacaatcg
ttagctgatggtgatatgacacaacctgtccccgtactggaaaatgattctaccaaggaa
aaacttagtcttgagctcaaggaaaagcacgataaaatgaaggcaagtggtagtttaaag
gcaatgcagtcattccgggagaagcttcctgcattcaaaatgaagtccgagtttctgaaa
gctgttgcagaaaatcaggtactagtagtttcaggagagacaggttgtggcaaaacaact
cagcttccacaatttattcttgaagcggagatctcctctttgcgtggtgccgattgcaac
ataatttgcactcaacctcgccgtatatctgctatttccgtctcagctcgtgtatcctca
gaaagaggagaaagtctaggtgaaactgttggttatcagattcggctggagtcaaagcgt
tcttctcaaacaaggctcctcttttgcacaactggagtattacttcgtcaattggtgcag
gatccagagttaacgggtgtaagccacttgcttgttgatgaaatccatgaaagaggcatg
aatgaggactttttactgataattctgcgggatctcctaccccgccgtccagatttacgt
cttattctaatgagtgcaacaatcaatgctgacttgttctctaaatactttggaaatgca
cctaccatacatataccgggattcactcatcctgtggctgagttgtttctagaagacatt
ttggagaaaacgcgctatagtatcaagtcagagtttgacaattttgagggaaactcaagg
aaaagaagaagacagaaagataccaagaaagatccgttaactgaattatttgaggaggtt
aatatcgatgctcaatatggatcttatagcacatcaacgagaaagtctcttgaagcttgg
tctggattacagcttgatctgggtctggtagagtcgactattgaatacatatgttgccat
gaaggtcctggtgcgattctcgtattccttacaggctgggatgacatttcaaagctactt
gacaaagttaaggcaaacagagtccttggagatccaagcaagtttatggttcttcccttg
catggatctatgcctaccatcaatcaacgtgaaatatttgataggccgccacctaaccaa
agaaaaattgtgctggcaacaaacattgctgagagtagcatcaccatagatgatgttgtg
tatgtcatagactgtggaaaggcaaaggagactagttatgacgctcttaacaaactggct
tgtctcttaccatcgtggatttcaaaagcttcagcacaccagagacgagggcgtgcgggc
cgtgtgcagcctggagtttgttataaattgtatccaaaaatgattcacgacgcaatgctt
caataccagttacctgaaatactccgaacacctctgcaagagctgtgcctccaaatcaaa
agtttgcagcttggaactgttggatcctttcttgcaaaggcacttcagccaccggatccc
cttgctgttcaaaatgcaattgagcttcttaaaactataggagctttagatgatagggaa
gagctcactccacttggttgccatctttgcactctgccattggagccaaacattgggaag
atgctactgatggggtctatctttcaatgccttaatcctgccttaataattgctgctgct
cttgctcatcgcgatccatttgtcctgcctatagacagaaaagaggtagctgatgctgca
aaaaggtcttttgccggtgactcatgcagcgatcacattgcacttcttaaagcttttgaa
ggctggaaggaggcaaaacgtagtgggaaggaaagagccttttgttgggagaacttttta
tctccggtaactttgcagatgatggatgatatgagaatgcagtttctggatcttctatcg
gatattggctttgtggacaagtcccggggtcctactgcttataaccagtacagtcacgat
ttggagatggtatgtgcaatcctttgcgccgggctgtatccgaatgttgtgcagtgcaaa
agaagaggaaagcggacggcgttttacaccaaagaagttgggaaagttgacatccacccc
gcatctgtcaatgctggagtacatctcttccctctaccttacatggtttatagtgagaaa
gtgaaaacaaccagcatttatatccgggactctacgaatatttcggattatgccttgtta
ctctttggtggtaatctcatacccagcaaaactggggaaggtattgaaatgctcggtggt
tatctccatttctccgcgtcgaagagtgttttggagttgatacggaaactgcgtggtgaa
ctggacaatcttttaaacaggaagattgaggaaccaagttttgacatttccagagaagga
aaggcagtggttgctgctgcgattgagttattgcacagtcaaaacgtacgatactaa
DBGET
integrated database retrieval system
