Morus notabilis: 21400322
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Entry
21400322 CDS
T07292
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21400322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21400322
03036 Chromosome and associated proteins [BR:
mnt03036
]
21400322
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
21400322
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
21400322
mRNA degradation factors
5'-3' decay
Decapping complex
21400322
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
21400322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
Dishevelled
CMS1
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
21400322
NCBI-ProteinID:
XP_024027687
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MNSNRGRYPPGIGAGRGGGMHANPAFQSRAPQQQYVQRNLVQNQTQQHYIQQQQHHQHQH
HHHQQQQQHQYQQQQQWLRRGQLGGVADSGVVDEVEKTVQSEAVDSSSQDWKARLKIPPP
DTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAK
NGTGKTAAFCIPALEKIDQDTNAIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGG
TSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCNMLVMDEADKLLSPEFQPSIEQ
LIRFVPENRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKV
HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN
GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED
RFNLYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaacagagggaggtatccaccagggatcggtgccggccgaggcggcggaatg
cacgcgaacccggcttttcaatcgagagcgccgcaacagcagtacgtgcagaggaatttg
gtgcagaaccaaacgcagcagcactatattcagcagcaacaacatcaccaacaccaacac
caccaccatcagcagcagcagcagcaccagtaccagcaacagcaacagtggctgaggagg
ggccaattgggcggcgttgcggattctggcgtcgttgacgaggtcgagaagaccgtgcag
tctgaagcagtggactcgagttcacaagactggaaggcaaggttaaaaatacccccacct
gatacccgctttagaacagaggatgtaacagcaactaaaggaaatgaattcgaggactat
tttctgaaacgtgagctactaatgggaatatatgagaaagggtttgaaagaccatcacct
attcaggaggagagtattccaattgctcttaccggtagtgatattcttgctagagccaaa
aatgggactggaaaaacggcagccttttgcatccctgccttggaaaagattgatcaagat
acaaatgccattcaagttgtgatacttgtcccaactcgcgagttggctcttcaaacatca
caagtctgtaaggagcttgggaagcatttgaatattcaagttatggttacaactggaggt
accagcttaaaggatgatatcatgcgtttgtatcaacctgttcatttacttgttggaact
cctggaagaattttagatcttgcaaaaaagggtgtctgtgtcttgaaggactgcaatatg
cttgttatggatgaggctgataaacttctgtcaccagagtttcaaccatcgatagagcag
ctgattcgctttgtccctgaaaatcgacaaattttgatgttttcagctacatttcctgtc
actgttaaggactttaaggatagatatctccaaaagccttatgttattaaccttatggat
gagcttactctaaagggtattactcaattttatgcttttgttgaagaaaggcagaaagtt
cactgcttgaacactcttttctccaagcttcaaataaaccaatcaattatcttctgcaat
tctgtgaatcgggtagaattgttggccaagaaaattacagaacttggctattcttgtttt
tatattcatgcaaagatgctccaagaccatcgtaatagagtttttcatgacttccgcaat
ggtgcatgcaggaatcttgtttgtactgatttatttactagaggaatagacattcaagca
gtcaatgtggttatcaacttcgattttcccaagaactcagaaacatatctccacagggtt
ggtcgatcaggaaggtttggacatcttggtttagctgtgaatttgatcacatatgaggat
cgctttaacttgtataggattgagcaggaacttggcaccgagataaagcaaattccaccc
catattgatcaggcaatttattgccggtga
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