Morus notabilis: 21400695
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Entry
21400695 CDS
T07292
Name
(RefSeq) protein PAT1 homolog 2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21400695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21400695
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21400695
mRNA degradation factors
5'-3' decay
Decapping complex
21400695
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
21400695
NCBI-ProteinID:
XP_024032137
LinkDB
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Position
Unknown
AA seq
801 aa
AA seq
DB search
MERSDGKDFRDFVENSSNNALFDASRYEFFGQNAGDEVELGGLEEEEDDKTLFGSVDTEY
HLFEREESAGFGSLSDIDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSAADWVQ
DADFSNWLDQHMFDTDITQEGKRWSSQPQASSGHFGDSKSSLYRTSSYPQEPVQQHFSTE
PIIVPKSAFTSFPPPGSRSQQASPHHANQSSISGGSQLPFSAPNLSHLSNANLHLAGLPH
GVHYGGNMSQFTNPGPSFNSRPQNHWVSHAGILHGDHPSLLNNILQQQLSHQNGLLSQQL
LSQQKRLHPSVQPSLAHFAALQSQLYNTHPSSSHRAMLGLSDIREQRPKHRGKQNRFSQA
GFDTSSQKSDSGRLQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQASLAKKASGS
RLKHPFCPSHLRELPSRGRNSTDQHSHLSVDALGRLPLSSIRRPRPLLEVDPPSTGSGDG
SSEQVSERPLEQEPMLAARITIEDGLSLLLDIDDIDRLLQYGQSQDGGIQLRRRRQMLLE
GLAASIQLVDPLGKNSHAIGLGPKDDLVFLRLVSLPKGRKLLSKFLQLLFPGSELVRIVC
MAIFRHLRFLFGGLPSDQGAVEATANLAKTVSACVNGMDLRALSACLVAVVCSTEQPPLR
PLGSPAGDGATVILKSVLERATELLTDPHAAGNCSMPNRALWQASFDEFFGLLTKYCLSK
YETIVQSIYAQTQPSTEVIGPEAAKAIHREMPVELLRASLPHTDEHQRKLLSDFAQRSMP
ISGINTRGSSGGQLNSESVRG
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctgatggcaaggattttagagacttcgttgagaattcctccaacaatgcc
ctctttgatgcgtcccgatatgaatttttcggtcaaaatgctggggacgaagtcgagctc
gggggactggaagaagaagaggatgacaagactctttttggctctgttgatactgagtac
catttgtttgagagagaagagagtgcaggttttggatctttgtctgatatagacgatctt
gcaagtacttttgcaaagttgaacaaagttgtaacgggaccaagacacccaggtgttatt
ggtgatagaggttctggatccttttcacgtgaaagttcgtctgctgctgattgggtgcaa
gatgctgatttctccaactggttggatcagcatatgtttgatacagatattactcaggaa
gggaagagatggtcgtcacagccacaagcttcttcgggtcattttggagattcaaaatct
tctttgtacagaacatcctcatacccacaggaacctgtgcagcagcacttctccactgaa
ccaattatagtgcccaaatcagccttcacatctttccctccacctggaagcaggtcccag
caggcttcgccacaccacgcgaatcaatcttctatttctggtggatcccagttgcccttc
tctgcaccaaacctctctcatttatctaacgctaatcttcatttggctgggttgcctcat
ggcgtgcattatggagggaacatgtctcagttcaccaatcctggcccgtcttttaatagc
aggcctcaaaatcattgggtcagccatgctggaatattgcatggggatcaccctagtctt
ttaaataatatattgcaacaacagctgtcacatcaaaatgggcttttgtcccaacaactg
ctgtcgcaacagaagagactgcatccttcagttcaaccttccttggcacattttgcagca
ctgcagtcccagctttataatactcatccatcttcctctcacagagcaatgcttggattg
tctgacataagagagcaaagaccaaaacacagaggcaagcaaaatcgtttttctcaagcg
ggctttgatactagtagtcaaaaaagtgatagtggcaggttgcagttcagatcaaagcac
atgacatccgaagagatagagagtattcttaagatgcagcatgctgcgacacatagcaat
gatccatatatagatgattactatcaccaggcaagtctagccaaaaaagcctctggatcg
aggttaaaacaccctttctgcccatctcacttgagggagcttccatctcgtggacgcaat
agtacagatcagcattctcatctttcagttgatgctcttgggagattgcccctctcttct
atacgtaggcctcgtccccttcttgaagttgatcctccatccactggttctggtgatggc
agttctgagcaggtttctgagagacctttggaacaagaaccaatgcttgctgctagaata
accatcgaagatggcctctctcttcttcttgatatcgatgatattgatcggctcctacaa
tatggtcagtcccaagatggaggcatacagcttaggcgaaggcggcaaatgctgcttgaa
gggttggcagcatcaattcagctcgttgatccacttgggaaaaatagccatgcaattggg
ctgggaccgaaggatgatcttgtgttcctccgtttagtctctcttccaaagggccggaag
ctcctttctaagttccttcaacttcttttccctggtagtgagcttgtccgaattgtttgt
atggctatattccgtcatttaaggtttttgtttggtggccttccatctgatcaaggagca
gttgaggcaactgctaatcttgcaaagacggtgtctgcatgcgtgaatggaatggatctt
cgggcactaagtgcttgtcttgttgcggttgtctgttctacagagcagccgccacttcgc
ccccttggaagccctgctggggatggagcaacggtcatcctgaagtctgttctggaaagg
gcaactgaacttttgactgatccacatgctgctggaaactgtagcatgcctaatcgcgct
ctctggcaggcttcctttgatgaatttttcggccttcttactaagtattgcctgagtaaa
tacgaaactatagtgcaatcaatatatgcacagacccaacctagcacagaggtaattggt
ccagaggcagcaaaagcaatacaccgagaaatgcctgtggaacttctaagagccagtctt
cctcacacagatgagcatcagcgaaagcttttatcggatttcgcacagcgatcaatgccc
atttctggaatcaacacccgtgggagtagcggtggccaattgaactccgaatcagtgagg
ggttaa
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