Morus notabilis: 21401186
Help
Entry
21401186 CDS
T07292
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21401186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21401186
Enzymes [BR:
mnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
21401186
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21401186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
21401186
NCBI-ProteinID:
XP_024027261
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MNRHRPTAAALSRALSRAFSASASAAEPSSASASSFPQKLVTRSNFEAALAELRRHVRAA
DFVAVDLEMSGVTSAPWRESLGFDRSDVLYLKVKHSAEKFAVIQFGVCPFRWDSSKQTFV
AYPHNFYIFPRQELPTIDRSSYEFIWQTGSIDFLARYQFDFNACIREGISYLSRRQEDEA
LRRLNSGDEDESSATCYNSKDAGDIPLVAMADILFSERMKNRLSEWHDWLLQPRNREFQF
QGSSNDSKQKFQTLFFMMWPAVNLIGFTSHQLRLIQLVVRKNFKDLTYVHVKGDNVFSQH
LVVYTDSKDDRDLLIKEVNNEHRKRAEKKIQAAVGFRHVVDLLSSERKLIVGHNCFLDIA
HVYNKFIGPLPSTAEEFVSSVSKYFPHIIDTKILLNTHQVLRQRMKKSKTSLSSAFTLLC
PHISLSFAALESYVKVEVEVDDLRSSSWNSGAKHDAGYDAFMTGCIFAQACGYIGIDFKL
HSPSESLAENEKLQKHINLLYLSWTNADIIDLTNGNKVTASVEYSQKKRYSNVVFENVVL
IWGFPSELKARHIRECFSKTFGVTSVTFVYQMDPTAVFVQFSKTKLVSDFLSLMETLEKN
NDPISVLHPLSELLKGGNTRAATYETYKQICGTPISKVLFADQAEAFGAKRKTDFVESSK
TAMDTQEDKNPVSENSVFVDLLSAPWGEKAAQAASNYAGKTKPGMIDNLENDSFHGCLSG
DEILNSVYAAEETQLVRTS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccaccgtccgaccgccgcggccctctcacgtgccctgtcacgtgccttctcc
gcctccgcctccgccgccgagccgtcatcggcgtcggcgtcgtcgttccctcagaagctg
gtgacgaggtcgaacttcgaggcggcgctggccgagctgcggcgccacgtcagggcggcg
gatttcgtggccgtggacctcgagatgagcggcgtcaccagcgcgccgtggcgcgagtca
ctcggcttcgaccgctccgacgtgctctacctcaaggtcaagcactccgccgagaagttc
gccgtcattcagttcggtgtttgccccttccgctgggactcttccaagcagactttcgtc
gcttatccgcacaatttctacatttttccgcgtcaagaacttcctacaatcgaccgctcc
tcttatgaatttatctggcagacaggatcaattgatttcctggctagataccaatttgat
ttcaatgcttgcatacgagaaggaatatcttatttatccagaaggcaagaagatgaagca
ctgagacgtctgaattcgggggatgaagacgagtcatctgcaacatgctataactcaaaa
gatgctggagacataccattagtcgctatggcggacattctcttttcggaaagaatgaag
aacagattaagtgaatggcatgattggttattgcagcctcgaaatagagagttccagttt
cagggcagttcaaatgactccaaacaaaaatttcaaaccctttttttcatgatgtggccg
gctgttaatctgattggattcacttctcatcagcttcggttgattcagctggtcgttaga
aaaaacttcaaagatctcacttatgttcacgtgaagggtgacaatgttttctcacaacat
ctagtggtctatacagattctaaggatgacagagacttactcattaaagaagtgaataat
gagcatcggaaacgagcagagaaaaagatccaagctgctgttgggtttcgccatgttgtc
gacctcttgtcctcggaacggaaattgatcgtcggtcacaattgtttcttggatattgct
catgtatacaacaaatttataggccctcttccctcaacagctgaagaatttgtttcctct
gttagcaagtactttcctcacattattgacaccaaaatcctactgaatactcatcaagta
ctccgacaaagaatgaagaaatccaagacatcattatcgtcagcattcaccttgttatgc
ccgcatatctctcttagctttgcggcacttgaatcctatgttaaggtggaggttgaagtg
gatgatttgaggtcctccagctggaattccggagccaagcatgatgcgggatatgatgct
tttatgacgggatgcatttttgctcaggcatgcggttatattggcattgattttaaactc
cattcaccctcggaaagtttagctgagaatgaaaaactccagaagcacatcaaccttctg
tatctcagttggactaatgcagacattattgatctaacgaatggtaataaggttacagcg
tccgtggaatatagccagaaaaagcggtactcaaatgttgtgtttgagaacgttgtgtta
atttggggatttccttccgaactcaaggcaaggcacataagagaatgcttctcaaaaacc
tttggtgtgacctccgttacttttgtctaccagatggatccaactgcagtttttgttcag
ttttccaaaaccaaactcgtctccgactttctcagtttaatggaaactctggagaaaaat
aatgatccaatctcggttttgcatcctctcagcgaacttttaaaaggcgggaacactcgt
gctgctacttatgaaacttacaagcaaatttgcggcacacctatttcaaaagtcttattt
gcagatcaggcagaggcattcggtgctaaacggaagaccgacttcgtggaatcttctaag
acagcaatggatactcaagaagataaaaatcctgtctcagaaaactccgtttttgtagat
ttattatcggcaccctggggtgagaaagcggcccaggctgcttcaaactatgctggcaaa
accaagccagggatgattgacaatttggaaaatgattcatttcatggctgcctctccggt
gatgagattttaaattctgtttatgctgctgaagagactcagctggtcagaactagttaa
DBGET
integrated database retrieval system
