Morus notabilis: 21401729
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Entry
21401729 CDS
T07292
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21401729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21401729
03009 Ribosome biogenesis [BR:
mnt03009
]
21401729
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21401729
Spliceosome [BR:
mnt03041
]
Complex A
U2 snRNP components
U2 related factors
21401729
Complex B
21401729
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
21401729
Ribosome biogenesis [BR:
mnt03009
]
Eukaryotic type
90S particles
Helicases
21401729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ResIII
SRP54
ABC_tran
AAA_30
T2SSE
AAA_7
Flavi_DEAD
NACHT
PhoH
AAA_29
TsaE
Motif
Other DBs
NCBI-GeneID:
21401729
NCBI-ProteinID:
XP_024020022
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MGTERKRKVSLFDVVDETSVSAKIANTNGAGGPMAGNSLVNTWTGKPYSQRYFEILEKRK
TLPVWQQKDEFMQVLRNNQTLILVGETGSGKTTQIPQFVLEAVEAEYPDKRRKWMVACTQ
PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLE
RYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFSGAPLMKV
PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPQGDILVFLTGEEEIEDACRKISKEI
GNLGDQVGPVKAVPLYSTLPPAMQQKIFDPAPPPVNEGGPPGRKIVVSTNIAETSLTIDG
IVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFSN
DLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDD
GNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADE
AKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNHRALKSADNVRQQLVRIMARFN
LKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPE
WVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYFDLENFPQCEAKRVLERLYKKREKERE
ESRNRK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggagaggaagaggaaggtgagcttgtttgacgtggtagacgagacctccgtg
tcggcgaagatcgccaacacgaacggtgccggaggtccgatggcggggaatagtctggtg
aatacgtggacggggaagccgtactcgcagaggtactttgagatcctcgagaagaggaag
acattgcctgtttggcagcagaaggatgagttcatgcaggttttgaggaataaccagact
ctaattttggttggtgagactggtagtggtaaaacaactcagatccctcagtttgttctg
gaagctgttgaggctgaatatccagataaaagaagaaaatggatggttgcgtgcacccag
cctcgtagagtggctgcaatgtcagtatctcgacgtgttgctgaagagatggacgtaacc
attggagaagaggttggttatagcattcggtttgaggactgcagtagtgcgaggacagtt
ttgaagtatctgactgatggtatgctcttaagggaagcaatgacagatccacttttagaa
cggtataaggtgataattcttgatgaggctcatgaaaggaccttggcaacagatgtgctc
tttggactcctaaaggaagtgctgaaaaatagacctgacctgaagctggtcgttatgagt
gcaactctggaggctgaaaagtttcagggttattttagtggcgcaccactcatgaaggtt
cctggtaggcttcatcctgtagaaattttttacacccaggaacctgaaagggattacctg
gaggcagcaattcggactgttgtgcaaatacatatgtgtgagcctcagggagatatactt
gtatttcttaccggagaggaggaaatagaagatgcgtgccgtaagatatccaaagagatt
ggaaatctcggtgatcaggttggccctgtgaaagcagtccctttatattcaactcttcct
ccggcaatgcagcagaaaatttttgaccctgctcctcctccagtgaacgagggaggccca
cctggaaggaagattgtggtgtcaactaacattgcagaaacttctttgaccatagatggt
atagtttatgttattgaccctgggtttgctaaacaaaaagtttacaacccaagagtgcgt
gttgagtcgttgttggtttccccaatatcaaaggctagtgcccatcaaagatcagggcgt
gctggaagaactcagccaggaaaatgttttagactttacacagagaggagttttagtaat
gatcttcaaccacagacttatccggaaatattgagatcaaacctcgctaatacagtcctt
actctgaagaagctgggcatagatgatctggttcattttgattttatggatccccctgct
ccggagacattgatgagagcgttagaggtgttgaattatctgggagcgttggacgatgat
gggaacctgacaaagctgggagaaatcatgagtgaatttccattagatcctcagatgtct
aagatgcttgttgtaagccctgaattcaactgttcaaatgagattctgtcgatttctgcc
atgctttcagtacccaattgctttgtccggcctagggaggctcaaaaagctgcggatgag
gcgaaagctaggtttgggcacattgacggagatcacctgacacttttgaatgtgtatcat
gcgtacaagcaaaataatgaggatccatcttggtgttacgaaaactttgtcaatcatagg
gctctgaagtctgcagataatgttagacaacagctagtccgcatcatggcacgatttaac
ctcaagttatgcagtaccgatttcaacagccgtgactactacatcaacataaggaaggcg
atgcttgctggatatttcatgcaggtagcacatctggagcgcactggacactacttgact
gttaaagacaaccaggtggtgcacttgcatccttcaaattgcctggatcacaaacctgaa
tgggtcatctacaatgagtacgtcttaacgagcagaaattttatacgaacagtaacagat
atccgtggcgaatggctagttgacatagcaccacattacttcgatctggagaacttccct
cagtgtgaggctaagagagttctcgagaggctttacaaaaagcgcgaaaaagagagggag
gagagtcggaaccgaaaatga
DBGET
integrated database retrieval system
