Morus notabilis: 21402145
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Entry
21402145 CDS
T07292
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21402145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21402145
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21402145
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
21402145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
21402145
NCBI-ProteinID:
XP_024018798
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWKKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKTRPPRLVHLETSIARHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVET
LEDLVSIGPPGLVKTVVTSPHQQSSSVREPVEDATSQDSIPETIAKTPPSKSSVMGSSTA
ITPAASHATSAPINIPSHNLSVVPTASAILSGSNSVRGTESTGATSSSSSVNVSTPMREE
EPGSFPGLRSSPSFSDTGLVRGIGRGGISSQPLPSVPLSSNNVVPGSSALGIVPSSFDMA
KRNILGADEKLGSSGMVQSLVLPPSNKTMLPQVAKSNNGTGSLDSSNVSEASSGRVLSPS
MVSGMPWRLGSEAGQIRGRTETEPDQREKFMQRLQQAHHNNPLGHKQFSGQQQNPLLQQF
ISQNASVSQAGIGLGVQMSGLGTVPSSTLPQQTSSVHQLSNQSALVSTGAKESEVGHAKV
DEQQQQNSPDDSAADPTTIGLRKNTMNEDELKAPHAIDSPVGVSGSLIELAQVSRDTDPS
AGQPLQANQSSGSLGVIGRRSVSDLGAIGDNITASSTVNSGGLHDQLYTLQMLDAAYYKL
PQPKDSERPRNYTPRHPAITPPSYPQVQAPIVNNPAFWERLGLEPPYGIDTLFFAFYHQQ
NTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDEYEQGTYVYFDFHVANDDLGIG
KGQGWCQRIKTEFTFEYNYLEDELIV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagtagaaagttacagggggagatagacagggttctgaagaaggttcaagaa
ggcgtcgaggtcttcgacagcatctggaaaaaggtttacgatacggacaatgcgaatcag
aaggagaaattcgaggccgacttgaagaaggagatcaagaagcttcaacgatatcgcgat
cagatcaagacttggattcagtccagcgagatcaaggacaagaaggttagtgcctcttat
gagcaggccctggtcgatgctcggaagctcatcgagcgcgagatggaaaggtttaaagta
tgtgaaaaggagactaaaacaaaggcattctctaaagaaggcttgggccaacaacctaaa
actgatccgaaagagaaggctaaatctgagacaagggattggttgaacaacgtggttggg
gagttggaatctcagattgacaactttgaagctgagctcgagggactatcggttaagaaa
ggaaaaacaagaccgcctagactggtgcatttggagacatctattgctcgacataaggct
catataatgaagttagaactgatcttgaggcttttagataatgatgaattgagtcctgag
caggtcaatgatgttaaagacttcttggacgactatgttgaacgtaaccaggaggatttt
gacgagttcagtgacgttgatgagctttacagttcattaccattggacaaggtggagaca
cttgaagatcttgtttcaattgggcctccgggtcttgttaagaccgttgtaacgtcacct
caccaacagagtagttctgtccgagaaccagttgaagatgcaacttcccaggacagtatt
cctgagacaattgctaaaactccaccttccaaaagtagtgtaatgggttcttcaactgca
attactccagctgcgagtcatgcaacttccgcacccataaatattccatctcataattta
tctgttgttccaactgcttctgcaatcctatcgggttcaaattctgtccgaggcaccgag
agcactggagctactagttcttcatcttctgtaaatgtttctactccaatgagggaagaa
gaaccaggaagctttcccggccttagatcatctccgtctttttcagatactggacttgta
agaggcattggtagaggcggaatctcaagtcaaccgttgcctagtgtcccgcttagttcc
aataatgtagtacctggcagtagtgcccttggcattgttccatcttcattcgacatggca
aagagaaacattttgggagcggatgagaaacttgggagtagtggcatggtgcagtctctt
gtattgcctccaagtaataagacgatgttgcctcaagttgctaagagtaacaatggaact
ggctcgcttgattctagtaacgttagtgaggcctcttctggacgagttctttccccttct
atggtatctggcatgccatggaggctgggaagtgaagcggggcagattcgtggaagaact
gaaacggaacctgatcagagggagaaatttatgcagcggctacaacaagcacatcacaat
aaccctcttggtcataagcagttttctggacagcagcaaaatccactattgcaacagttt
atttctcaaaatgcttctgtctctcaagctggtattgggcttggagtccagatgtcaggc
cttggcactgttccatcttccaccttgccgcagcagacaagttccgtccatcaattgtct
aatcaatcggcattggtttcaactggcgcaaaagaatctgaagttggtcatgcaaaagtc
gatgagcagcagcaacagaattcaccggatgattcagccgctgaccctacaactattgga
ctcagaaagaataccatgaatgaggatgagttgaaagctccacatgccattgattctcca
gtcggagtttcaggctcattaatagagctagctcaagtatcaagagatactgatccctct
gccgggcaaccattacaggccaatcaatcttctggcagccttggtgttattggccgaaga
agtgtctccgatctgggtgccattggtgacaatattacagcgtcatcaactgttaactcc
gggggactgcatgaccaattgtacactttgcagatgcttgatgctgcttattacaagctc
ccacaacccaaagattccgaacgcccaaggaactatactccgaggcatcccgcaattact
cctcctagctacccacaagtacaggcaccaatagttaacaatccggcattttgggaacga
ctaggtctcgaaccaccttatggcattgacacactcttctttgccttttatcatcagcag
aacacttatcaacaatatttggctgcaaaagagctgaagaagcagtcttggagataccac
aaaaaatacaacacttggtttcagcggcacgaggagccgaaagtcgccaccgatgaatat
gaacaggggacatacgtgtacttcgatttccatgtggccaatgacgatctaggaataggg
aaaggccaaggatggtgtcagcggatcaagactgagtttacgttcgagtataattatctt
gaagatgaacttattgtataa
DBGET
integrated database retrieval system
