Morus notabilis: 21402673
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Entry
21402673 CDS
T07292
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mnt
Morus notabilis
Pathway
mnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
21402673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21402673
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21402673
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
21402673
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
21402673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
21402673
NCBI-ProteinID:
XP_010092677
UniProt:
W9QZB1
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MEDSEGVLSFDFEGGLDTTAGGCPPNAAAASAALIHPDSSAAAASNNLAASNSAVSADPT
SGGGGGASNPGRGRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECRE
QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHS
NKFFQQRNAGGFAQLGEKPLLPLGPNAVSQGVVGKPSILESANVQQPQQQVQPSQQPVGQ
NQIQNVFTGLPNQANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
AFDCAENVILIFSVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKLC
ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKR
EEEKAKGVDPDNGGENPDIVPFEDNEEDEEEESEDEEESFSQVLGANQGRGRGRGVMWPP
HMPLSRGARPMPSMQGFPPVMIGADGSPYGPVTPDGFPMPDLFNVGPRAFNPYGPRFPGD
FMGPTSGMMFRGRPTQPGAVFPGGGFGMMMGPGRAPCMGGMGVQGTSPARPMRPGAMPPM
FQQPPPPSQNMNRPPRRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAK
ARQEDQYGAGNSFRNDESESEDEAPRRSRHGDGKKKRRSSEEDAATGSDH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcggagggagttctcagcttcgacttcgagggcggcctcgacaccaccgcc
ggtggctgccctcccaacgctgccgcagcctccgctgctctaatccaccccgattcctcc
gccgccgccgcctccaacaatctcgccgcctcaaactccgccgtctcggcagaccccact
tccggtggcggtggcggtgcctccaatcccggacgtggtcggagcttccggcaaaccgtg
tgccggcactggctgcggagcctgtgcatgaagggggaggcctgcgggttcctgcaccag
tacgacaagtcgcggatgccggtctgcaggttcttccgcctctacggcgagtgccgcgag
caggactgcgtctacaagcacaccaacgaagatatcaaagaatgtaacatgtacaagtta
ggtttttgtccaaatggtccagattgccgttacagacatgcaaagttgcctggacctcca
ccctctgtggaagaagtccttcagaagattcagcatttgagttcttacaactaccactca
aacaagttttttcaacaaaggaatgctgggggttttgctcaactaggagaaaaacctctg
cttccacttggccctaatgcggtcagtcaaggtgtcgtcggaaaaccgtcaatattggag
tctgctaatgtccagcagccacagcagcaggtacagccgtcccagcaacctgttggtcag
aaccagatacaaaatgttttcactggcctgcctaatcaggcaaacagaacagtagcacct
ctgcctccaggaatatctaggtattttattgtaaaaagttgcaaccgtgaaaatctggaa
ttatctgtacaacaaggagtatgggcaactcaaaggagcaatgaagctaaacttaatgaa
gcttttgactgtgctgaaaatgtaatcttaattttctcagtcaatcggactcggcatttc
cagggttgtgcaaagatgatttcaagaatcggtgggtctattagtgggggaaactggaaa
tatgcgcatggaactgcgcattatgggcggaatttctcagtcaaatggttgaagttatgc
gaactatccttccacaagactcgccatttaaggaatccgtacaatgagaacttgccagta
aagattagtagagattgtcaagagctagagccctcaattggtgagcagttagcttcgctg
ctttatcttgaaccagatagtgaacttatggcaatctcgcttgcggctgaatcaaaacga
gaagaggaaaaagctaagggagtcgacccagataatggtggagagaacccagatatagtc
ccatttgaggacaatgaagaggatgaagaagaagagagtgaagatgaggaagagagcttt
agccaggttcttggggcaaatcagggtagaggaagaggcagaggagttatgtggcctcct
cacatgccacttagtcgtggggctagacctatgcctagcatgcagggatttccaccggtt
atgattggtgctgatgggtcaccttatgggcctgttacacctgatgggtttcccatgccg
gatcttttcaatgtaggccctcgtgcttttaatccatatggtcccagatttcctggtgat
tttatgggacctacatctggcatgatgttccgggggcgacctacacaaccgggggctgtg
tttcctggtggtgggtttggcatgatgatgggtcctggacgtgctccgtgtatgggaggt
atgggagttcaaggcacaagtccagcccgacctatgcgtccaggtgctatgcctccaatg
tttcagcaacccccaccaccgtcacagaacatgaatcgtcccccaagaagggatcagagg
ggactggccaatgataggaatgagagatatggtgcagggtcagaccaagtcagaggtcag
gagatgtctggtccagccggtggaccagaggatgatgcacattaccaactaggagcaaag
gctcgccaggaagaccagtatggtgctggaaacagctttagaaatgatgagagcgaaagt
gaggatgaggccccaagacggtcgaggcatggagacggaaagaagaaacggcgaagctcc
gaagaagatgctgctactggctctgatcactag
DBGET
integrated database retrieval system
