Morus notabilis: 21403144
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Entry
21403144 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21403144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21403144
03012 Translation factors [BR:
mnt03012
]
21403144
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21403144
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21403144
Translation factors [BR:
mnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
21403144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
dsrm
nSTAND3
AAA_22
T2SSE
ATPase
AAA_19
AAA_23
Myosin_head
AAA_16
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
21403144
NCBI-ProteinID:
XP_010103984
UniProt:
W9RVG3
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MRNSKAANAIGFLIARAKSSTNNPYFSLLLSSYSSSRANNNLRSLLLLSSSSSAISHGRF
LIANRSFCGYAAEQFSDDEYDDIENHQASSSVANIDEWKWKLSLLLRNEKDQEIVSRDKR
DRRDYEQISNLAKRMGLYCEMYGKVVVASKVPLPNYRPDLDDRRPQREVVIPLGLQRRVE
GLLQEHLDRAELSSGKVTNNMGDDKSIDQVECINLDDNADSFLDQSVMEKVLQRRSLRMR
NMQRAWQESPEGRKMLEFRKSLPAFREKDRLLQAIAQNQVIVISGETGCGKTTQLPQYVL
EAEIESGRGAFCSIICTQPRRISAMAGSERGSTERGEPLGETVGYKVRLEGMKGKNTHLL
FCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIILKDMLPRRRDLRLILMSAT
LNAELFSNYFEGAPTIHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQK
QLASRKRKNQITALVEDALNKSSFENYSARARDSLSSWVPDCTGFNLIEAVLCHICRKER
PGAVLVFMTGWEDISCLRDQVKAHPLLGDPNRVLLLTCHGSMATSEQKLIFDKPPPNVRK
IILATNMAEASITINDVVFVVDGGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRV
QPGECYHLYPRCVFEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGVFLSAALQPPEPLA
VQNAIDFLKMIGALDENEDLTNLGKFLSVLPVDPKLGKMLIMGAIFHCFDPILTIVSGLS
VRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSA
QTLQAIHSLRKQFSYILRDASLIDVDASNNNRLSHNQSLVRAVICSGLFPGISSVVHRET
SMSFKTMDDGQVLVYANSVNARYQTIPYPWLVFGEKIKVNTVFIRDSTGVSDSVLILYGG
SLHQGVQAGHLKMLNGYIDFFMDPSLAECYLKLKEELNKLIQGKLQDPSLDIHKEGKYLM
LAVQELVSGDQCEGRFVFGRETKKPKETDDNSRFTRDGTNPKSLLQTLLMRAGHSPPKYK
TKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNSHHEDDNSRPD
VTDNMLKLLGKRRRSKRR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaattcaaaggcagccaatgccataggttttctaatagcccgcgccaaatcctcc
accaacaatccatacttttctcttcttctctcttcttactcttcttccagggcaaacaac
aacctgcgttctctgcttctgctatcttcttcctcttcggccatttctcatggcagattt
ctcatcgcgaatcggagcttttgcgggtacgccgctgagcagttctccgacgacgaatac
gacgatattgagaatcaccaggcatcgtcttcggtcgctaacatagacgaatggaaatgg
aaactcagccttctattaagaaacgagaaggaccaagagattgtatccagagataaaaga
gatagacgagactatgagcagatatctaatcttgccaaaagaatgggactttattgtgaa
atgtatgggaaagtcgtagttgccagcaaagttcctcttcctaactacaggccagatttg
gatgataggcggccacagagggaggtggttatacctctgggcttgcagaggagggtggag
ggtttattgcaggaacacctagatcgagccgagttaagttctggaaaggtcactaacaat
atgggtgatgataagtctattgatcaggttgagtgtattaacctggatgataacgctgac
tcattccttgatcaatctgtcatggagaaggttcttcagaggagaagtttgcgaatgcgt
aatatgcaaagagcttggcaagaatcacctgaaggtaggaagatgctggaatttcggaaa
tctctaccagcattcagggagaaggataggttgctgcaagctattgcacaaaatcaggtg
attgtaatatccggtgagactgggtgtgggaagaccactcaacttccgcaatatgtatta
gaggcagagattgagtctggacgaggagcattctgtagcatcatctgtacacaaccacgg
agaatatctgctatggctggttcagaaagagggtctacagagagaggagagcctcttggt
gaaacagttggctataaagttcgattagaggggatgaaagggaaaaacactcacttgctc
ttttgtacaagtggtattttacttcgacgcttgctgagtgatcgcaacctaaatggaata
acccatgttttcgttgatgaaattcatgagcgaggcatgaatgaagacttcctattgatc
attttgaaggatatgcttccacgccgtagggatttgcgattaattttgatgagcgctact
ctaaatgccgagctattttctaattattttgaaggggcgccaacaattcatattccgggc
tttacatatccagtacgagcacactttctagaagatgtactggaaatgactggctataag
ctgacttctttcaaccaaattgatgattatggccaagagaaaatgtggaaaacacagaag
cagctggcttcacgaaaaaggaaaaaccaaattactgctcttgttgaggatgctcttaat
aaatcaagctttgagaattatagtgctcgggcacgcgactctctatcatcatgggtacct
gattgcacaggtttcaatcttattgaggcagttctatgccatatatgtcgaaaggaacga
cctggtgctgttttagtgttcatgactgggtgggaggatatcagctgcttaagggatcaa
gttaaagctcatcctttgttgggtgatcctaacagagttctgcttctaacatgccatggt
tcaatggcaacttctgaacagaaacttatatttgacaaaccacctccaaatgtacgtaaa
ataattctcgctacaaatatggcagaggcaagcattacaatcaatgatgtagtgtttgtg
gttgatggtggaaaggcaaaagagacaacatacgatgccttgaacaataccccttgtcta
ctaccttcttggatatcacaagcatctgctcggcaaagaaggggtcgggctgggcgtgtg
cagccaggcgaatgttaccacctttatcccagatgcgtttttgaagcttttgcagaatat
cagcttcctgaactgttgagaactcctttaaactctctatgcttgcaaataaagagcttg
caggttgggagtataggcgtgttcttgtcagcagctctgcaaccgccagaaccacttgca
gttcaaaatgccatcgactttttgaagatgattggggcgctagatgagaatgaggattta
acaaatcttggaaaatttttgtccgtgctcccagtagatcccaaactagggaaaatgctg
atcatgggagctatctttcactgttttgatcctattcttacaatagtatctggccttagc
gtcagggatcctttcttattgcctcaagacaagaaagatttagcaggaacagcaaagtct
agattttcagcaaaggattacagtgatcacatggcccttgttcgtgcatatgaaggatgg
aaagatgcagaaagagaaggatcggcatatgagtattgctggaggaattttctctcagcc
cagacacttcaggccatccattctcttcgaaagcaatttagctacattctaagagatgct
agcttgatagatgttgatgcaagcaacaataaccgattgagtcacaaccaatcattagtt
cgtgcagtcatttgttctgggctgtttcctggcatatcatctgtagtgcaccgagagaca
tccatgtctttcaaaacaatggacgatggccaagttttagtatatgcgaattctgtaaat
gcacgttaccaaactattccttacccatggttggtctttggggaaaaaataaaggtcaac
actgtcttcatacgtgattctactggcgtatctgattcagtacttatcctttatggtggt
tctttacaccaaggagtacaggctgggcatttgaagatgttgaacggttatatcgacttt
ttcatggatcctagtttggccgagtgctatttgaagcttaaggaagaacttaataagctt
attcaaggaaagcttcaagatcctagcctggacattcacaaggaagggaagtaccttatg
cttgcagttcaagagctggtatctggagatcaatgtgaagggaggtttgtatttggcagg
gaaaccaagaagcccaaggaaactgatgacaatagcagattcaccagagacggtacaaat
ccaaagagccttcttcaaactctgttgatgagggcaggacattctcctcccaagtacaaa
accaagcacctcaagacaaacgagttcagagcgcttgtagagttcaaaggtatgcagttt
gttgggaagcccaagagaaacaagcagctcgccgagagggatgctgccatcgaggcattg
gcatggttgactcacacttccgacaacagccatcatgaagatgataactcccgacctgat
gtcacggataacatgctgaaacttcttgggaagcgtagaagatctaaacgtcggtga
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