KEGG   Morus notabilis: 21403526
Entry
21403526          CDS       T07292                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mnt  Morus notabilis
Pathway
mnt03030  DNA replication
mnt03410  Base excision repair
mnt03420  Nucleotide excision repair
mnt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mnt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    21403526
   03410 Base excision repair
    21403526
   03420 Nucleotide excision repair
    21403526
   03430 Mismatch repair
    21403526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mnt03032]
    21403526
   03400 DNA repair and recombination proteins [BR:mnt03400]
    21403526
Enzymes [BR:mnt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     21403526
    6.5.1.6  DNA ligase (ATP or NAD+)
     21403526
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     21403526
DNA replication proteins [BR:mnt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    21403526
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     21403526
DNA repair and recombination proteins [BR:mnt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     21403526
   NER (nucleotide excision repair)
    Other NER factors
     21403526
   MMR (mismatch excision repair)
    Other MMR factors
     21403526
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 21403526
NCBI-ProteinID: XP_010111844
UniProt: W9SH65
LinkDB
Position
Unknown
AA seq 788 aa
MLKLRSCHCLRPVPISFPRLNFPYFSILISRPFFPTPITLSRNPRPHHLTAMSSRPSAFD
ALMSGARAAAAKKKAQPSSSPKKRKSPDSKPSQNPDSATVLETEAKGQENGDAAGNAVAC
KEVAALPAAKKVCVSASAQERTAQLKSKIAQLKRKAGDFDPKLIDCLKEGEKVPFLFLCL
AFDLIANETGRIVITDIVCNTLRTVMHTTPDDLAAVVYLSANRIAPAHEGLELGIGDASI
IKALAEACGGTEKQVKNKYQVLGDLGLVAKASRSSQTMMRKPDPLTVTKVFDTFCLIAKE
SGKDSLEKKKNHIKALLVAATDCEPQYLIRLLQAKLRIGLAEQTLLAALGQAAVYSEKHS
NPPPKVQSPLEEAVKIVKQVYSVLPVYDKIIPALLSDGVWNLPKTCNFTPGVPVGPMLAK
PTKGVSEIVQRFQDTEYTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVAVVS
RLKKSSVNSFVLDCELVAYDREKQKILPFQILSTRARKNVVMSDIKVDVCIYGFDMLYLN
GRPLLQEELKVRRECLYESFEEEAGFFLFATAITSNDIEEIQKFLDASVDASCEGLIIKT
LNKDATYEPSKRSLNWLKLKKDYLDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNN
NEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYAETISPDVWFEPTEVWEVKA
ADLTISPVHRAATGIIDPDKGISLRFPRLVRVREDKTPEQASSSEQVADMYTAQSHNHSN
NQDDNEDD
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgctcaagcttcgttcatgccattgcctacgcccagtcccaatctctttcccccgcctc
aatttcccctatttctctatcctcatctccagacccttctttcctacccccataaccctc
tccagaaaccctagaccccatcatttgaccgctatgtcttctcgcccctccgctttcgac
gctctcatgtccggcgctcgcgccgccgccgccaagaagaaggcccagccctcttcttcc
cccaagaaacgcaaatccccggactcaaaaccctctcaaaaccccgattcggcgaccgtc
ttggaaaccgaagcgaaaggccaagaaaacggagacgccgctggaaatgctgttgcgtgt
aaggaggtggcggcgctgccggctgcaaagaaagtttgcgtgtcggcgagcgcgcaagag
aggacagcgcagttgaagagtaaaatcgctcaattgaagagaaaggctggggatttcgat
ccgaaattgatcgattgtttgaaggagggagagaaagttccgttcttgttcctctgtttg
gcttttgacttaattgcgaacgagacggggaggattgtgatcactgatatcgtgtgcaac
accttgcggacggtgatgcacaccacgcctgatgatttggcggccgtggtttacctctca
gcgaaccggattgcgccggcacacgaggggctggagctcggaatcggggatgcctcgatt
ataaaggcgcttgcagaagcttgtggggggactgaaaaacaggtcaaaaataagtatcag
gtattgggagatttaggtcttgttgcaaaagcaagccgctcttcccagaccatgatgcgc
aagcctgatccattgactgttacgaaagtttttgatacgttttgtctcattgctaaggaa
tctgggaaggatagtctagagaagaaaaagaaccatatcaaggcacttcttgttgctgct
actgattgtgaacctcaatatttaatccgattgcttcaggcaaagttgcgaattggattg
gcagagcagactttattggctgcattaggacaagcagctgtatatagtgaaaaacattca
aatcctcctccaaaagttcagtctccattagaagaggctgtaaagattgtaaaacaagtg
tactctgtacttcctgtttatgataaaataatcccagcccttctcagcgatggtgtgtgg
aatcttccaaaaacatgtaattttactccaggtgtccctgttggacctatgttagcaaag
ccgacaaagggagtgtctgagattgtacaaaggtttcaggatacagaatacacctgtgaa
tacaagtacgatggagaacgtgcacagatacattatttggaggacggttcagttgagata
tacagtcgaaatgctgagcgaaacactggaaaatttcctgacgtcgtcgctgtagtttca
aggttaaagaagtcatctgtaaactcatttgtcttggattgtgaactggtcgcttatgac
agagagaaacagaaaattcttcccttccagatactcagcacacgagctcgcaaaaatgtg
gtcatgagtgatatcaaggttgatgtttgcatatatgggtttgatatgttgtatcttaat
ggtcgacctcttcttcaggaagaactaaaagttcgtagagagtgtctctatgagtcgttt
gaggaagaggctggattttttttatttgccacagcaataacttcaaatgatatcgaggaa
atacaaaagtttcttgacgcttctgttgatgccagttgtgagggtcttattatcaaaacg
ttgaataaagatgctacatatgaaccctccaagcggtctcttaactggctcaaattgaag
aaggattatttggatagcataggggactcactggatttggtacctattgctgcttttcat
ggtcgaggaaaacgcacaggtgtctatggtgcctttctcctagcttgttatgacaacaac
aatgaggagtttcagagcatttgtaaaattggcactggattttctgaagcaatgctggaa
gaacgttctgctagcctccgttctaaagtgattccaaaaccaaagtcatattatcgctat
gcagagaccattagtccagatgtatggtttgagcccactgaggtttgggaggtgaaagct
gcagacttaactattagccctgttcatcgtgctgcaactggcatcatagatcctgataag
ggcatttcacttcggttcccgcgccttgttcgtgtccgagaggacaagactccagagcaa
gcttcatcatctgagcaggtggctgatatgtacactgctcaaagtcacaatcattcaaat
aatcaagatgataatgaagatgattga

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