Morus notabilis: 21403772
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Entry
21403772 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21403772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21403772
03012 Translation factors [BR:
mnt03012
]
21403772
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21403772
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21403772
Translation factors [BR:
mnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
21403772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
ATPase
AAA_19
nSTAND3
T2SSE
PhoH
NACHT
ABC_tran
Myosin_head
Motif
Other DBs
NCBI-GeneID:
21403772
NCBI-ProteinID:
XP_024023289
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MEVFLKPHYTINKTLKPCSCYALALRLGFVVRKKYYCKFVRSFFRDMGSNYKAFSGTASD
RPKSLREKLGLNTSTTTSLGSSNQQQCDSTHQNIEEWKKKLTMLLRNEDQQELVSREKED
RRDFNQISALATTMGLYSRQYAKAIIFSKFRLPNYRPDLDDMRPQREVIIPLELQLQVHD
LIRAHISKKPTSREILSDNPLLRSSSSNRSLAIKDLDEQQRSLVHNSSANEKILLRKSWI
LRCQQQEWQESPEGQKMLEYRRSLPAYKERDALLKAISENQVVIVTGETGCGKTTQLPQY
ILESEVEGTRGALCSIICTQPRRISAMTVSERVAAERGEPLGESVGYKVRLEGTKGRDNR
LLFCTTGILLRRLISDRTLRGISHVIVDEIHERGKYEDFLLIVLKELLPRRPELRVILMS
ATLNAELFSSYFVGAPTIHIRGFTHPVKVHFLEDILEMTGYRLTPQNQIDDYGEENMRRK
RKKGMSLGKRKSWIASSVEDTLKAADFNEYSPKTRVSLSLWNPDSIGLNLVEHVLCHIVR
KERPGAVLIFMTGWGDIKALKDQLHSNPLLGDPSKALLLACHSLMPIDEQKLIFDRPKDG
VRKIILATNIAETSITIDDVVFVVDCGKANESLYDALNNLPCLLPNWISKAAAGQRRGRA
GRVQPGECYHLYPRCVYDSLSEFQLPQILRTPLESLCLHIKSLQLGSISEFLSKAPQPPE
PLSVQNAVEYLKTVGALDEDENLTVLGRYVSMLPVEPKLGKMLILGAIFNCLDPIMTVVA
SLSLRDPFVTSFDRRREADTAKAQFAADDCSDHLAFLRAYEGWRDAERQLSGYDYCCRNF
LSQQTIRGIDFLRRHFFRSLKNIGLVDHNMESCSLWSHDTHLIRAIICAGSFPSLCSVMK
AKKSVMLRTMEDGHVLLGLNSVNFPASEIPYPWLVFNEKVKITAVVLRDSTAVSDSVLLL
YGGRISRGEEDGHLKMLDGYLDFFMEPNLADTYVFLKEELDELIQKKLLNPQMDIRSHSN
LLSAVRLLISGDRCLGQFVTGREVPAASSQKAKEEMLPVPVSQRGTAGNSGSGDNSKNRL
QTLLIRARCGPPTYKTKQLSDDQFLAVVIFKGMYVTGNHCRTKELAEEEAAAEALLWLQG
EGHSSSTDSTDRMLMVLDKNENVDMNFTGGSESHVRDRLVSLA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttccttaaaccccattacaccattaacaagaccctcaagccttgttcttgt
tatgctctggctctgcggttgggcttcgtcgtgaggaagaaatattactgtaagttcgta
aggagcttcttccgagacatgggttctaactataaggccttttcagggaccgcttctgat
cggccaaagagtctcagggaaaagctcggtcttaacactagtactactacttcattgggg
tcttcaaaccagcaacagtgtgattcaacccatcaaaacattgaggaatggaaaaagaag
ttaacaatgttgcttcgtaatgaagatcaacaagaactggtgtcaagggagaaagaggac
agacgtgactttaaccaaatttctgcacttgcaacaacaatgggtctgtatagccgtcaa
tatgccaaagcaattatctttagtaaatttcgtctaccaaactacagacctgatttggat
gatatgcgcccacagagagaggtgatcatacctctggaactgcaattacaagtacatgat
cttataagagcccatatttctaagaagccaacaagtagggaaattttatcggataatccc
ttattgagatcaagcagcagcaatagaagtttagccattaaggatcttgatgagcagcag
aggagtttggtccataatagtagtgccaatgagaaaatcctactgcgtaaaagttggatt
ctgcgttgtcagcaacaggaatggcaggaatctcctgaaggtcaaaagatgctggaatat
cgcagaagtcttcctgcatataaagaaagagacgctttgttaaaagcaatatcagaaaat
caggttgttattgtgacgggcgaaactggttgtggtaaaacaacacaacttccccagtac
attttagaatctgaggttgaaggtactcgtggagctctctgtagtattatatgcacccaa
cctagacggatatcagcaatgactgtttctgaacgagttgctgcagaacggggagagcca
ctaggggagtctgtaggttacaaagttcggctggaaggaacgaaaggcagggataatcgt
cttctcttttgcactactggtatattgttaaggaggttaatcagtgatagaaccttgaga
ggtatttcccatgttattgttgacgagattcatgaacgtggaaagtatgaagatttcctt
cttattgtcctgaaggaacttcttcctcgccgaccagagttgcgggtgattttgatgagc
gcaaccttaaatgctgagcttttctcttcctactttgttggcgctccaacaatccatatt
cgtggttttacgcaccccgtgaaagtacattttttggaggacattttggaaatgacggga
tatcggttaactccacagaatcaaattgatgattacggtgaagaaaacatgaggagaaag
cgtaagaaaggcatgtctctaggaaaacgaaaaagctggattgcttcttccgtcgaggat
acacttaaagctgccgactttaatgagtatagtccaaagactcgggtttccttatcgtta
tggaatcccgactcaattggattgaaccttgttgagcatgtgctttgtcacatagttagg
aaagaaaggcctggtgctgttttaatttttatgactggctggggtgacataaaagcttta
aaggatcagcttcattctaatccactcttgggagatcctagcaaggccttgctgcttgca
tgtcatagtcttatgcccatcgatgaacagaaattgatatttgatcgaccaaaagatgga
gtgaggaaaatcatacttgctacaaacatagctgagactagcattaccatcgatgatgta
gtttttgttgttgactgtggaaaagcaaacgagtcattgtatgatgcattaaataatctt
ccttgtttgcttccaaactggatttcaaaggctgctgcagggcaaagaagaggaagagct
ggtcgtgttcaaccgggggagtgctaccatctatatcccagatgcgtctatgattcatta
tctgagtttcagctgccgcaaattttgagaacaccactggagtctttgtgtttgcatatc
aaaagcttacaacttggaagtatttcagagtttctatcgaaggcccctcagcctcccgaa
cctctatcggttcagaatgccgtagaatatttgaaaaccgttggagctttagatgaagat
gaaaatctaacagttttaggacgctacgtgtcaatgcttccagttgagcctaagcttgga
aagatgctcatattaggggctattttcaactgccttgatcccatcatgactgttgttgca
agcctaagtctcagagatccgtttgtgacttcttttgacagaaggagggaagcagataca
gcaaaagcacagttcgcagctgatgattgcagtgaccatctggcatttcttcgagcttat
gagggttggagagatgctgaaagacaattatctggttatgattactgctgtagaaatttt
ctttctcaacaaactatacgaggcattgatttccttcgtaggcatttctttcgttccctc
aagaatattggtctcgttgatcacaatatggaaagctgcagtctttggagccatgataca
catcttatccgagcaattatctgtgcgggctcattccccagcttatgctctgttatgaaa
gcgaaaaagtctgtaatgttgagaacaatggaagatggtcacgtacttctcggtctgaat
agtgtaaattttccagcatcagaaattccctatccttggctggttttcaatgaaaaggtg
aaaataactgcagttgttctccgagattcaactgccgtgtcagattctgtgcttcttcta
tatggagggagaatttccaggggtgaagaagacggacacctgaaaatgttagatgggtac
ttggattttttcatggaacctaacttagcagatacatatgtgtttttaaaggaggagctt
gacgaactgattcagaagaagcttctgaatccccagatggacatacggtctcattccaat
ctcctttctgctgtaagattactgatttcaggggaccggtgtctgggacaatttgtcact
ggtcgtgaggtgccagcagcatcctcacaaaaggcaaaagaagagatgctgcctgtgcct
gtttcacaacggggtactgcaggcaatagcggcagtggggataattccaaaaaccggctg
cagacgttgctcatcagagccagatgcggaccacccacctacaaaacaaaacaactgagt
gatgaccaattccttgcagtagtaatcttcaaagggatgtacgttacggggaaccattgc
cgcactaaggaacttgcagaggaggaggcagctgctgaggctttgctttggttgcaaggc
gaaggccattcatcttccacagattctactgaccgaatgttaatggttttagacaagaat
gagaatgttgatatgaatttcacaggcggctctgagagtcatgttagagatagattagtc
tccttggcctaa
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