Morus notabilis: 21403773
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Entry
21403773 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21403773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21403773
03012 Translation factors [BR:
mnt03012
]
21403773
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21403773
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21403773
Translation factors [BR:
mnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
21403773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
AAA_19
nSTAND3
T2SSE
ATPase
AAA_16
AAA_30
ABC_tran
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
21403773
NCBI-ProteinID:
XP_024023595
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MPCSALFQGYIRTMSVGPTTSLAFLRSHNSKTLKPSSSLLWGLVTRQKNRCHYCSCSRHT
KGSFNFNRHVGRRELKCVASSGTVEADWRQTRRSAAAPFLQQQSLNYGRYAYQDTASSDD
SDLELGVSGSRQQTCGSTLDNIEEWRWKLTMLMRNENEQELVSREKKDRRDFDQISALAT
RMGLYSRQYAKVVVFSKVPLPNYRPDLDDKRPQREVILPYGLLSEVDYHLRAHLSKKSSS
RDSLSNNSLSRSSSSSSIANDDGIYEQQEPLIRNSAMEKILQRKSLNLRFKQQEWQETPD
GQKMLELRKSLPAYKSRDALLKTISENQVVVVSGETGCGKTTQLPQYILESEIEAARGAS
CNIICTQPRRISAIAVSERVAAERGEALGESVGYKVRLEGMKGRDTRLLFCTTGILLRRL
LVDRTLRGVTHVIVDEIHERGMNEDFLLIVLKELLPRRPELRLILMSATLNAELFSSYFG
GAPTIHIPGFTYPVRAQFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQAQSLRKRKSQ
IVSSVEDALETADLREYSPRIRDSLSCWNPDSIGFNLIEHVLCHIVRNERPGAVLVFMTG
WDDINSLKDQLQSHPLLGDPSGVLLLACHGSMPISEQKLIFDKPEEGVRKIVLATNMAET
SITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYP
RCVFDAFSDYQLPELLRTPLQSLCLQIKTLRLGSISEFLSRALQPPEPLSVQNAVEYLKI
IGALDEDENLTVLGRNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFD
KKDLAESAKAQFSARDYSDHLAIIRAYEGWKDAEREQSGYEYCYRNFLSAQTLRAIDSLR
KQFFYLLKDTGLVDQTKESCNLFSHNEHLIRSIICAGLFPGLCSVVQNKEKSIVLKTMED
GQVLLYSNSVNGGVPKIPYPWLVFNEKVKVNSVFIRDSTAVSDSVLLLFGGSISMGGLDG
HLKMLGGYLEFFMTPESAKMYLYLKKELDELIQMKLLNPQMDIQSHPELLSAVSLLVSGD
QCEGRFVFGRQLPASSKKAKKELLPVAKGGIKGSDGDNSKGQLQMLLARAGHGQPNYKTT
QLKNKQFRSKVIFNGLDFIGQPCNNKKLAEKDAASQALLWLQGDSHSSPTDVDHMSMLLT
KSGKKKSQKGTAFHGAKWS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgctcagccctgtttcagggctacataagaaccatgtccgtgggacccaccact
tctctggccttcctcaggtcccacaacagcaagaccctcaaaccatcttcatctctgttg
tggggtttggtcacaaggcaaaagaaccgctgccactactgcagctgtagccgccacact
aagggctcgttcaacttcaaccgtcacgtggggcgtcgggagctcaagtgcgtcgcgtcc
tccgggaccgtcgaggcagattggcggcagacgcggaggagcgctgcggcgcctttcttg
cagcagcagagcctgaattacgggcgctatgcataccaggatacggcgagcagcgacgat
tcggacctcgagttgggggtctcgggttctaggcagcaaacgtgtgggtcaacccttgat
aacattgaagagtggagatggaagttaacaatgttgatgcgtaacgaaaatgaacaagaa
ttggtatcaagggagaagaaggacagacgtgattttgaccaaatttcggcactggcaaca
agaatgggtttatatagccgccaatatgcaaaggttgttgtctttagtaaagttcctcta
ccaaattacagacctgatttggatgataagcgcccacagagagaggtgatcttaccatac
gggttactatcagaagtagattatcatcttagagcccatctttctaaaaagtcatccagc
agggatagtttatcaaacaattccttgtcaagatcaagcagcagcagtagtattgccaat
gatgacgggatttacgagcagcaggagccattgatccgtaatagtgccatggagaaaatc
cttcaacgtaaaagtttgaacctgcgtttcaagcaacaagaatggcaggaaacacctgac
ggtcaaaagatgcttgaacttcgtaaaagtcttcctgcatataaatcgagggatgcattg
ttaaaaaccatatcagaaaatcaggttgttgtcgtctccggtgaaactggttgtggtaaa
actacacagcttcctcagtacattttagaatctgagattgaagctgctcgtggagcttcc
tgtaatattatttgtacgcagcctagacgtatatcagccatagccgtttctgaaagagtt
gctgcagaacggggagaggcactgggggagtctgtgggttacaaagttcggctggaagga
atgaaaggcagggatactcgccttcttttttgcactactgggatattattgagaagatta
cttgttgatagaaccttgaggggtgttacacatgttattgttgacgagattcatgaacgt
ggaatgaatgaagatttccttcttattgtcctgaaagaactacttcctcgtcgaccagag
ttgaggttaattttgatgagtgccaccctaaatgccgagcttttctcttcctacttcggt
ggggctcctacgatccatattcctggttttacatatccggttcgagcacagtttctggag
aacattttggaaatgactggataccggttaactccatataatcaaattgatgattacggt
caagaaaaggtgtggaaaatgcaaaagcaagcacaatccctgagaaaaaggaagagtcag
attgtttcttcagtagaggatgcacttgaaactgcagacttgagagagtatagtccgagg
attcgagattccttatcctgttggaatcctgactcaattggatttaatctcattgagcat
gtgctttgtcacatagttaggaatgaaagacctggtgctgttttagtttttatgactggc
tgggatgatattaactctttaaaggaccagcttcagtctcatcctctcttgggagatcct
agcggggtcttgttacttgcatgtcatggttccatgcccatctctgagcagaaattgata
tttgataagccggaagaaggagtaaggaaaattgtacttgccacaaacatggctgagact
agcatcaccataaatgacgtagtttttgttgttgactgtggaaaagcgaaagagacatca
tatgatgcactgaataacactccctgtttgctcccatcctggatttcaaaggctgctgca
cggcagagaagaggaagagctggtcgtgttcaacctggagagtgttaccatctctatcct
agatgtgtgtttgatgcattttcggactatcagctgccagaacttttaagaacaccactg
cagtccctgtgcttgcaaatcaaaaccttacgacttggaagtatttcagaattcctatct
cgggccttgcagcctcctgaacctctttcggtgcaaaatgctgtagaatatttgaagatc
attggggctttagatgaagatgaaaatctgacagttttaggacgcaacctatcaatgctt
ccagttgagcctaaacttgggaaaatgctcatattaggggctattttcaactgtcttgac
ccagtgatgacggttgttgcaggccttagtgtcagagatccatttctgatgccttttgac
aagaaggatttagcagagtcagcaaaagcgcagttctcagctcgtgattacagtgaccat
ctggcaataattcgagcttatgagggttggaaagatgcagaaagagagcaatctggttat
gagtactgttacagaaatttcctttctgcacaaactttacgagccatcgactctcttcgg
aagcaattcttttatttgctcaaggatactggtctggttgatcaaactaaagaaagctgc
aatctatttagccataatgagcatcttatcagatcaattatctgcgctggtttgttccct
ggattatgctctgttgtgcagaacaaggagaaatctatagtgttgaaaacgatggaagat
ggtcaagtacttctctactcgaattctgttaatggcggggtaccaaaaattccatatcca
tggctagttttcaacgagaaggtgaaagtgaattcagtttttatccgagattcaactgcc
gtgtctgattctgtgcttctcctattcggagggagcatttccatgggtggactagatggg
cacctgaaaatgttaggagggtacttggaattttttatgacgcctgaatcagcaaagatg
tatctttatttgaagaaggaacttgacgaactgattcagatgaagcttctgaatccccag
atggacatacaatctcatcctgaactcctttctgcagtaagtttactggtttcaggggac
cagtgtgaggggagattcgtctttggtcgccagttgccagcatcctccaaaaaggcaaaa
aaggagttactacctgttgccaaaggaggcattaaaggtagtgatggggataactccaaa
ggtcagctgcagatgttactcgccagagctggacatggacaacccaactacaaaacgaca
caactgaaaaataaacagtttcgttcaaaagtgattttcaatggattagacttcatcggc
caaccttgcaacaataagaaacttgcagaaaaggatgcagcttctcaggcgttgctttgg
ttgcaaggcgatagtcattcgtctccaacagatgttgaccatatgtcaatgctcttgacg
aaaagtggcaaaaagaaaagccagaaaggaactgcgtttcacggtgctaaatggagttaa
DBGET
integrated database retrieval system
