Morus notabilis: 21405122
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Entry
21405122 CDS
T07292
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mnt
Morus notabilis
Pathway
mnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
21405122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21405122
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
21405122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
21405122
NCBI-ProteinID:
XP_024030767
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MDENFEEQNKLPELKLDAKQAQGFLSFFKRLPQDPRAIRFFDRRDYYTVHGENATFIAKT
YYHTTTALRQLGSGSNSLSSVSVSRNMFETIARDLLLERTDHVVELYEGSGSNWTLVKSG
TPGNISSFQDILFANNEMQDTPVVVALVPNFRENSCTIGLGYVDLTKRVLGLAEFLDDSH
FTNVESALVALGCKECLLPAETGKSNENRTLYDSLTRCGVMLTHRKKAEFKTRDLVQDLG
RLVKGSIEPVRDLVSGLDFAPCALGALLSYADLLADETNYGNYTIRKYNLNSYMRLDSAA
IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLNMWLKQPLLDVNEINSRLDLVQAF
VEDPALRQDLRQHLKRISDIERLTNNLEKKRVGLQHIVKLYQSCIRLPYIKSALQQYDGQ
FSSLIKERYLDSLEILTDEEHVNKFIGLVETSVDLDQLENGEYMISSSYDPALSLLRDEQ
ESLDREISNLHKQTAKDLDLPVDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDKYQKMLEEYKNCQKELVNRVVQTAATFSEVFGSLAGLLSELD
VLLSFADLASSCPTPYTRPDITSSDEGDIILQGSRHPCVEAQDWMNFIPNDCELVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKATISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASIVKGATDKSLIIIDELGRGTSTYDGFGLAWALCEHLVAVIKAPTLFATH
FHELTALAHGNPDHKPNSKHIVGVANYHVSAHIDTSTRKLTMLYKVEPGACDQSFGIHVA
EFANFPETVVALAREKASELEDFSPNTIISNGFKHEAGSKRKRECDPDDISRGAARAHQF
LKEFSELPLEKMDRKQIMEKISMLNDDMQKDAVNSQWLQQFI
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaattttgaggagcagaacaagcttcctgagctcaaactagatgccaagcaa
gctcaagggtttctctcattcttcaaaagacttccccaggacccaagagctattagattc
tttgatcgccgggactactatactgttcatggagaaaatgcaaccttcattgcaaagacc
tactaccatacaaccacagctttgcgacaattgggtagtggttcaaatagcctctctagt
gtgagcgtcagtagaaacatgtttgaaacaatagcccgtgatcttcttttggagagaacc
gaccatgttgttgagctctatgagggtagcggctcaaattggacactggtgaaaagtgga
actcctggaaatatcagcagtttccaagatattttatttgccaacaacgagatgcaggac
acccctgttgttgttgcactagtacccaactttcgtgaaaatagttgcactattgggtta
ggttatgttgatctaacgaaaagagtgcttgggcttgcagagtttcttgatgacagccac
tttaccaacgtggaatcagctttggttgctcttggttgcaaggaatgtcttttgcctgca
gagactggaaaatctaatgaaaatagaactttgtatgattcattgaccagatgcggcgta
atgttaactcacagaaagaaggctgagtttaagacaagggatctggtgcaagatcttggt
agacttgtcaaaggttctatagagccagttcgggatttagtttctgggcttgattttgca
ccttgtgctttaggggcgctactctcttatgcagatctactggcagatgagaccaattat
ggaaattatactatccgaaaatacaatctcaacagctacatgagattagattctgctgca
attagggcgcttaatgtcctggaaagcaaaacggacgcaaacaaaaatttcagtctattt
ggccttatgaatagaacatgtactgccggaatgggaaagcgattgttgaacatgtggctg
aaacagcctctgttagatgtaaatgaaatcaattccagactggatttagtacaagcattt
gtggaagatcctgcacttcgtcaagatttaaggcagcatcttaaaagaatttcagatatt
gagcggctgacgaacaatcttgagaagaaaagggttggtctgcagcatattgtaaaactc
taccagtcatgtataagacttccatacataaagagtgctctacaacagtacgatggtcaa
ttttcctcactgataaaggaaaggtacttggattctcttgaaatcttgacggatgaagag
catgtgaataagttcattggtctagtggaaacttctgttgaccttgatcaactcgagaat
ggagaatacatgatatcatctagttatgaccctgcgttatctttattgagagatgaacaa
gagtcgctagaccgcgaaataagcaatttgcataaacaaactgccaaggatcttgatcta
ccagtggataagggtttgaaattggataagggcacacaattcggacatgtatttaggatt
acgaagaaggaagagccaaaaataagaaagaagcttaccacccaattcattgtcctggaa
actagaaaggatggagtgaaatttacgaacacaaagcttaagaagttgggagacaagtat
caaaagatgcttgaggagtacaagaattgtcagaaagaactggttaaccgagtagttcaa
acagcggcaactttctctgaggtattcgggtcattggcaggtctgctttctgaattagat
gtcttacttagttttgctgatttggcttctagttgtccaactccttacactagaccagat
atcacttcatcggatgagggagatatcattttacaagggagtagacacccttgtgttgaa
gctcaggactggatgaactttataccaaatgattgtgaacttgtgaggggtaaaagttgg
ttccaaatcatcacaggacctaatatgggtgggaaatccacttttatacggcaggttggt
gtgaacattctgatggcacaagttggttgtttcgttccatgtgacaaagctaccatttct
gttcgtgattgcatttttgctcgagttggtgctggtgactgccaactacgcggggtttct
acctttatgcaagagatgctcgagactgcatcgattgtgaaaggtgctacagataagtca
ttgataatcattgacgagctgggccgtggaacctcaacttatgatggctttggtttagct
tgggccctctgtgagcaccttgttgcagtgattaaagcacctactttgtttgcgacccat
tttcatgaactgactgcactagctcatggaaatcccgaccataagcccaacagcaagcat
attgttggtgtagcaaactatcatgttagtgcacatattgacacgtcaactcgcaagctg
accatgctgtacaaggtcgagccaggggcttgtgatcaaagtttcggtatccatgtagca
gaattcgcaaattttcccgagacggtcgtggcccttgccagagaaaaggcttctgaattg
gaagatttctcacccaacacaattatctcaaatggttttaaacatgaggcggggtcgaag
cgcaagagagagtgtgatcctgacgatatctctcggggtgcagcccgggcacatcagttc
ttgaaggaattctccgagttgccgttggagaaaatggatcgaaagcagataatggaaaaa
ataagcatgttgaatgacgacatgcaaaaagatgcagtaaactctcagtggctccagcag
ttcatctga
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