Morus notabilis: 21405183
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Entry
21405183 CDS
T07292
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21405183
09123 Folding, sorting and degradation
03018 RNA degradation
21405183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21405183
03041 Spliceosome [BR:
mnt03041
]
21405183
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21405183
mRNA degradation factors
5'-3' decay
Lsm complex
21405183
Spliceosome [BR:
mnt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
21405183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
21405183
NCBI-ProteinID:
XP_010089849
UniProt:
W9QJF6
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSGGPGLESLVDHTISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDEDLDSSLDWSKMRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtccgggacttgagtctcttgtagatcatacaatatcagtcataacaaat
gatgggcgcaatattgtgggaatcttgaaagggtttgaccaggccacaaatatcattctt
gacgaatctcacgaacgtgttttctccacaaaggaaggtgttcagcaacttgtgttgggg
ttgtatataatcagaggcgacaacataagcattgttggggaactagatgaagatcttgat
tccagtctcgactggtcgaaaatgagagctcatcccctaaaaccagtcatccattga
DBGET
integrated database retrieval system