Morus notabilis: 21405974
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Entry
21405974 CDS
T07292
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
mnt
Morus notabilis
Pathway
mnt03022
Basal transcription factors
mnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
21405974
09124 Replication and repair
03420 Nucleotide excision repair
21405974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21405974
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21405974
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
21405974
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
21405974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
21405974
NCBI-ProteinID:
XP_024029093
LinkDB
All DBs
Position
Unknown
AA seq
70 aa
AA seq
DB search
MVNATKGLCITCDIPMAQFIINMNNSLPASQKFIIHVLDSTHLFVQPNAAEMIRGAIAEF
RDRNSYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgcaaccaaaggactgtgcatcacctgtgacataccaatggcacaattcata
atcaacatgaacaattcgctgcctgcgtcgcagaaattcataatacacgttttggatagc
acccatttgtttgtgcaacccaatgcggctgagatgatacgaggtgccattgcagagttt
agagaccgaaattcctatgagaagcctgcttaa
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