Morus notabilis: 21406512
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Entry
21406512 CDS
T07292
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21406512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21406512
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21406512
mRNA degradation factors
5'-3' decay
Decapping complex
21406512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
PEP5_VPS11_N
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
21406512
NCBI-ProteinID:
XP_024018764
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MASPSNPNPNLNPNLNPNQQPSFDVQKFFTAPPPPSPTISHLQNPNNPPPSFPIPPSSYP
PPSSAFSYPPQTSPFHHQQFHHHQFPQTPPFHPHHLPQTPPFHHPHQLPSNLHQQQRSLS
YPTPPLNPNPPPPTSSSSGGARIMALLGAQTPVELPSPPPPAQPSPSSSANSNPEFSAAA
VVPSGVPSRMPSGKLPKGRHLGGDHVVYDVDVRLQGEVQPQLEVTPITKYGSDPQLVLGR
QIAVNRSYICYGLKQGNIRVLNIHTALRSLFRAHTQRVTDMAFFAEDVHLLASVSVEGRL
YVWKISEGPDEEGTPQITGKIVIAIQIVGEGEASHPRICWHCHKQEVLVVGFGKRVQRFD
TTKVGKGEVFSAEEPLKCPVDKLIDGVQFIGKHDGEVTDLSMCQWMATRLVSASIDGTIK
IWEDRKAQPLAVLRPHDGQPVNAATFLTAPHRPDHIILITAGPLNREVKIWASASEEGWL
LPSDAESWKCTQTLELKSSAKPRVEEAFFNQVVALPQAGLLLLANAKKNAIYAVHLEYGP
NPVSTRMDYIAEFTVTMPILSFTGTSISPHGEHILQVYCVQTQAIQQYALDLSQCLPPPL
ENSGLDRSESNLSHDGIAIEGFSALDTAGSKPPDISTVASALKPTVQVGSTEAVTRYPVS
SNPIEVTTSKDVTTQSIESKAAALTPMASYADIVRVPSTPPLPLSPKLSGKPSGLRTPTD
NFELGSTFNDHTGEQAVNDYSVDRQMDAAHVNLPDVLSVDEDLRNDEKKVAQDDYSSVIS
PPVMFKHPTHLITPSEILMAASSSESTKSVEGKGGSEASIQDVLANGDAENAELEVKVVG
ETRSPNDDFGAQEESQTIVSENREKYFYSQASDLGTEMAQECCAISADTYITDEARQVDG
ASSKQHAQPSPAGEEDQDSTKDVSARISESSTPTAVTTVQTPNTKAKKKGKSSQASGASS
LSFSVLNSIDTNHEPAGSSSLEAAFPQIVAMQEALSQLMSMQKEMQKQMSMVVAVPLTKE
GKRLEAALGRSMEKAVKANNDALWARFQEENAKNEKQFRDRTQQITTLINNVMTKDLPTI
LEKTLKKELAAVGPAVVRTITPVIEKTISSVIADSFQRGVGDKAVNQLEKSVNSRLEATV
ARQIQAQFQTTGKQALQDALKSSFEAYAMPALEMSCKAMFEQVDAAFQKGIAEHTNATQQ
HFETANSPLALTLREAINAASSVTQTLSGELADGQRKLIAFAAAGANTGGVNPLVTQLSN
GPLGGLHEKVEAPLDPTKELSRLISERKYEEAFTGALQRSDVNIVSWLCSQVDLRGILSM
VPLPLSQGVLLSLLQQLACDINKEASRKLGWMTDVAAAINPADPMISLHVRPIFEQVYQI
LHHQRSLPTMTGPELTSIRLLMLVINSMLMACK
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgagcaatcccaatccaaatctaaatccaaatctaaatccgaatcagcag
ccctccttcgacgtccagaaattcttcaccgctcctcctccgccatctccgacgatctcc
cacctccaaaaccctaacaatccaccgccgtcgtttccgattcctccgtcgtcgtatccg
cctccctcctccgccttctcctaccctccccaaacgtcgccgtttcaccaccaacagttc
caccaccaccagtttccccaaacgccgccgtttcacccccatcatctcccccaaacgccg
ccgtttcatcaccctcaccagctcccttccaacctgcaccagcagcagcgttccctttct
tatcctacgccccctctcaaccctaaccctcctccccctacctcctcctcctccggtggg
gcccgaatcatggcccttctcggcgcccagacaccagtcgaattgccttctccaccgcct
cctgcgcagccctcgccgtcctcctccgccaattccaatcccgaattctcggccgcggcg
gtggtgccctcgggggttccgagtcggatgccgagcggtaagctgccgaaggggcggcat
ttggggggcgatcacgtcgtctacgacgtcgacgtgaggctgcaaggggaggttcagcct
cagcttgaagttactcccatcaccaagtatggctccgatcctcaattggtgttgggccgc
caaattgcggtcaaccggtcctacatttgctatggcttgaagcagggcaacattcgggtt
cttaatatccacaccgccttgagatctttgttcagagcccacactcagagggtcacagac
atggctttttttgctgaggatgttcaccttttggctagtgtgagcgtagaaggacggctt
tatgtttggaaaatttctgagggtcctgatgaagaaggtacaccacagatcacagggaag
attgtgattgccattcaaattgtaggagagggggaagcttctcatccaagaatttgttgg
cactgccacaaacaagaagtgctggtagttggatttggaaaacgtgttcaaagatttgat
actacaaaagttggaaagggggaagtattttcagctgaagaacctcttaaatgtcctgtt
gataagctgattgatggtgtccaatttattggtaaacatgatggcgaagtaactgattta
tcaatgtgccaatggatggccacaagattggtttctgcttcaatagacggcacgataaaa
atctgggaagataggaaggcccaaccacttgcagtcttgagaccccatgatggccagcct
gttaatgcagctacattcttaactgctccccacaggccagatcacatcatactcatcaca
gctgggccattgaaccgagaagtgaagatttgggcctcagccagtgaagaaggctggttg
ctgcctagtgatgctgaatcatggaaatgtacccagacattagaattgaagagttcggcc
aaacctcgagttgaggaggcattctttaatcaagttgtagcgttgccacaagcaggcctg
ctcttacttgcaaatgctaagaagaatgctatatatgctgttcatctagaatatggtcct
aatccagtgtccacacgcatggattacatagcagaatttactgtgactatgcctattttg
agttttactgggacaagtatatcacctcacggtgaacatattcttcaggtttattgtgtt
cagacacaggctattcaacagtatgctttggatttatctcagtgcttgcctccaccatta
gagaactcgggattagataggtctgagtccaatctttcacatgacggaatcgctattgaa
ggattttctgctttggatacagctggaagtaaacctcctgatatctcaacagttgcgtct
gcactgaaaccaactgtacaagtaggtagtacagaagctgtcacgaggtatcctgttagc
tcgaaccctattgaggtgactacttcaaaagatgttaccactcagagtatagagtccaaa
gctgctgctttgacaccaatggctagttatgctgacattgttcgtgttccatcgacaccg
cctcttcctttgagccccaagttgtctgggaaaccttctggtttaagaacacccacagat
aactttgaattgggatccacgttcaatgatcacactggagaacaggcagttaatgattat
tcagttgaccggcaaatggatgctgctcatgtgaacttgcctgatgtgctctcggtggat
gaggatttgaggaatgatgagaagaaagttgcacaagatgattactctagtgtgattagt
ccccccgtcatgttcaaacacccaactcatctgataaccccctctgagatcttaatggct
gcttcatcctcggaaagcactaaatctgttgagggtaagggtggaagtgaggcaagcatc
caggatgtgcttgcgaatggcgatgcggagaatgctgagttggaagttaaagttgtgggt
gaaacaagatctccaaatgatgattttggagctcaggaagagtctcaaactattgtttca
gagaacagagaaaaatatttttactcccaggcgtcagatcttggtactgagatggcccaa
gaatgctgtgcaatatctgctgatacttacattacggatgaagctcggcaagttgatggt
gccagcagtaagcaacacgcccaaccttctcctgccggtgaggaagaccaagattctaca
aaagatgtatctgcaaggatatcagaatcgtctacacccacagcagttacaaccgtacag
actccaaatactaaagcgaaaaagaagggaaaaagctctcaagcatctggtgcatcttcc
ctatcatttagtgttctcaattccatagataccaaccatgagccagctgggagctcaagt
ctggaagctgcgtttcctcaaattgtggctatgcaggaagcccttagtcagctaatgtcc
atgcaaaaagaaatgcagaagcagatgtcgatggtggttgctgtcccactcacaaaggaa
ggaaaaagactggaggcggctcttgggcgaagcatggagaaggctgttaaggccaacaat
gatgctttatgggctcgttttcaagaagagaatgcgaaaaatgagaagcaatttcgagac
cgtacacagcaaattactactttgattaataacgttatgaccaaggacttgccaaccatc
ctagagaagacactgaagaaggaattggcagcagttggaccagccgtagttcgtacaatt
actccagttattgagaaaacaatatcttcggtcattgcagattccttccagagaggggtg
ggtgacaaggctgtgaatcaattagagaaatcagtaaattcaagacttgaagctacagtt
gccagacagatccaagcacagtttcaaactactggtaaacaagctcttcaggatgctcta
aagtctagttttgaagcctacgcgatgcccgccttggagatgtcatgcaaagccatgttt
gaacaagtagatgcggcgttccaaaagggaattgctgaacatactaatgcaactcagcag
cactttgagaccgcaaattctccattggcactgacattaagggaagctattaatgcggca
tcatctgtcactcaaacactaagtggagagctggccgatggtcaacggaagctgatagct
tttgcagctgcgggagcaaacacagggggagttaatcccctggttacccagctaagcaat
ggtcctttaggtggtctccatgagaaggttgaggcacctttggatccaacgaaggagttg
tcacggttaatatcggagcgcaagtacgaggaggcctttactggagctcttcaaagaagt
gacgtgaacatagtatcgtggttgtgttctcaggttgatttgcggggaatcttgtcgatg
gttcctctgcccttgagccaaggcgtgctgctttccctgttgcaacagttggcctgtgat
atcaacaaggaagcatcccgaaagctggggtggatgacagatgttgcagccgccataaac
ccggctgatcccatgatctccttgcatgtcaggccaatcttcgagcaagtctaccaaata
ttgcaccatcaacgcagcttgccaacgatgacgggtcctgaactcaccagtatcagactc
ctcatgcttgtcatcaactccatgctaatggcctgtaaatga
DBGET
integrated database retrieval system
