Morus notabilis: 21406525
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Entry
21406525 CDS
T07292
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
mnt
Morus notabilis
Pathway
mnt03013
Nucleocytoplasmic transport
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21406525
09122 Translation
03013 Nucleocytoplasmic transport
21406525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21406525
03041 Spliceosome [BR:
mnt03041
]
21406525
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
21406525
Spliceosome [BR:
mnt03041
]
Complex C
Other components
EJC/TREX
21406525
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
21406525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
eIF2A
DSE1_N
WD40_RFWD3
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Tricorn_2nd
TRM82_WD
WDR90_beta-prop_4th
PAC11
Beta-prop_IFT80_2nd
Beta-prop_Nup120_160
Beta-prop_WDR41
B-prop_COPA_B_2nd
TP_0598_N
CFAP251_N
Beta-prop_ACSF4
MCCA_BT
Beta-prop_WDR11_1st
WD_LRWD1
PSII_BNR
DUF7099
SdiA-regulated
CNH
Motif
Other DBs
NCBI-GeneID:
21406525
NCBI-ProteinID:
XP_010092392
UniProt:
W9QYM4
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MEETIPFKNLHSREYQGHKKKVHSVAWNCNGTKLASGSVDQTARVWHIEPHGHVKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQADLSGENINITYKPDGT
YIAVGNRDDELTILDVRKFKAIHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLAYPSL
RPLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF
NHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKYNLLVYAGDDKNKYQA
DEGVFRIFGFESSSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacaattccctttaaaaatctccatagcagagagtatcaaggtcacaagaag
aaggttcattccgtggcttggaactgcaatggcactaagctcgcctcgggttccgtggat
caaacggctagggtttggcatattgagccccacggacatgttaaggtcaaagatattgaa
ttgaagggacacactgacagtgtggatcagctatgttgggatcctaaacatgccgatcta
attgcaactgcatcaggagacaagactgtacgtctgtgggatgcacgtagtggaaaatgc
tcgcaacaggcagatcttagtggtgagaacattaacatcacctacaaaccggatggcaca
tacattgcagttggtaatagggatgatgagctaacaattttggatgttaggaaatttaag
gcaattcataagcggaagtttaattacgaggtaaatgagattgcttggaacatgacaggc
gatatgttctttttgacaactggaaatggtactgttgaagtgctagcatacccatctctt
cggccacttgacactcttatggctcatacagctggttgctattgcattgcgattgaccca
attggaagatattttgcagtaggaagtgctgattctttagttagcttgtgggatatctca
gagatgctttgtgtgcggacgtttacgaaactcgaatggcctgttaggacgataagcttc
aaccatactggtgaatatatcgcttcggctagtgaggacttgttcattgatatatcgaat
gttcaaacgggacggacggtgcatcagattccatgtcgggctgctatgaacagtgttgaa
tggaatccaaaatacaatttacttgtgtatgccggggacgacaagaacaaatatcaggct
gatgaaggtgtttttcgaatatttggatttgaaagcagcagcgcctga
DBGET
integrated database retrieval system