Morus notabilis: 21407503
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Entry
21407503 CDS
T07292
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21407503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21407503
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
21407503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_14
TPR_16
TPR_12
TPR_9
TPR_CcmH_CycH
TPR_19
TPR_7
BTAD
TPR_20
Motif
Other DBs
NCBI-GeneID:
21407503
NCBI-ProteinID:
XP_024020114
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MEEAEVRRLQDSVEGDPDDASLRFHLGVLLWNDEKSKEKAAEQLVAAARLNPQNGGVFRY
LGHYYCCYHKDTDRAVKCYQRALSLDPNDSDSGEALCDLLDNRGNHTLEVSVCREASNKS
PKAFWAFRRLGYLQVHLKNWSEAVPSLQHAIPGYPTSPDLWETLGLAYHRLGRFTAAIKS
YGRAIELESTRVFALVESGNIHLMLGSFKKGIEQFRQALEVSPKCISGNYGLASGLLGLA
KEYVYLGAFRWGATLLEEACKVAKETTVLAGNLSCIWKLHGDIQLTYAKFYPWAVEIQGL
ELTVEAFNSSIVSWKRACYLAATSARCSYQRALLLAPWQANIYTDIAISSDLVSSLTECP
SHDLNAWQPPEKMALGALLLETENYEFWVALGHLSNHNTLKQHALIRGLQLDASLAVAWA
YLGKLYRRNNERQLARQAFDCSRSIDPSLALPWAGMSADFHAGEPAADEAFESCLRAVQI
LPLAEFQIGLAKLAVVSGHLSSPQVFGAIMQAVERTPHYPESHNLKGLVCEARYDYLSAA
ASYRLARCRAADSFSCVSKSQIRDISINLARSLSKAGNFLDAAQECENLKIEGLLDAEGL
HIYALSLWKLGQSNLALSVVKNLAASVSSMEHIYAAASVSFICRLLYSISGLDSAINSIL
KMPKELFQSSRISFIVSAIHALDRSNRLESVVASSRYYLKSPEDISGMHFLIALGKLVKN
GSGSSLGFNSGVAHLRKALHMYPNSGLLRNLLGYLLLSGEEWNDSHLATRCCFGDVSNGL
VKGLKSTYEILGAGSVACYALSTRNPKFSFPTCSYQCLNPEATEQLQKCLRREPWNQSVR
YLLILNLLQKAREERFPHNICIMLERLICVALSDECYSQIDVSYQYQKFQLLLCASELSL
QGGNQNGCVNHAKNASSITLPDGYLFFAHLLLCRAYASDGDLTNLQKEYIRCLELKTDCY
VGWIYLKIIESQYGLQNDLNLSELNFNGCLMEGKDPPNMWMAVFHLVQGLICVWKQDFLS
AEDFLRRACSLASAESCLQLCHGATCLELARQWCDSQLLLLAIRSLRRAREASATPLPFI
SALLAQAEGSLGSKEKWENSLRHEWFTWPPEMRPAELFFQMHLLARQSRAGPDSSNVECC
QSPQRWVLRAIHTNPSCVRYWKVLQKLDG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggaggtgcgacgactacaagattccgtcgagggcgatcccgacgatgct
tctctccgttttcatctcggcgtgttgctgtggaacgacgagaaatcgaaagaaaaagcg
gcggagcagttggtagcggcggccagattgaaccctcagaacggcggcgttttcaggtac
ctagggcattactactgttgctaccacaaagacactgacagagctgtcaagtgctaccag
agagctctctccctcgaccccaacgattccgattccggggaagcgttgtgcgatttgttg
gacaaccgaggaaaccacactctggaggtctccgtctgccgggaagcctccaacaagtca
ccgaaggccttttgggcatttcgcagattgggttacttgcaggtccatcttaaaaactgg
tccgaggccgttccctctcttcaacatgccattccaggctatcctacgtctcctgatctc
tgggagactcttggccttgcctaccaccgactcggcaggtttaccgctgcgatcaagtcc
tatggaagagccatcgaattggagtcgacgagggtctttgctttggttgaaagtggaaac
atccatttgatgcttggttcattcaaaaaaggaattgagcagtttcgtcaggccctggag
gtctctcctaaatgcatatctggaaactatgggcttgcttcgggacttctcggtctcgca
aaggaatatgtttatttgggagcatttcgatggggagctacattgttagaggaggcatgt
aaagttgctaaggaaactaccgtcttagctggaaatttgtcatgcatttggaagctgcat
ggtgatattcagctcacatatgcaaaattttacccatgggcggtggagatccagggttta
gaacttactgtcgaagcttttaattcttccattgtttcctggaaacgtgcctgctatttg
gctgcaacttccgccagatgttcttatcagcgagctttgctcttggctccatggcaagca
aatatctatacagatattgcaattagttcagatcttgtatcctctttgaccgagtgccct
agtcatgacttaaatgcttggcagccaccagagaagatggccttgggggccttgttactt
gaaactgaaaattacgagttctgggtggctttgggacatttgtctaatcataacacatta
aaacaacatgctctaattcggggtttgcaactggatgcatctctagctgttgcttgggca
tacttagggaagctctataggagaaataatgagaggcaattggcaagacaggcttttgat
tgctcgagaagtatagatccttcacttgcattaccatgggctggcatgtcagctgatttt
catgctggggagccagcagcagatgaggcttttgagagttgtttacgagctgtgcaaatt
ttgcctcttgcagaatttcaaattggtcttgctaagcttgcagtggtttcaggacatctt
tcatctccacaggtttttggagctatcatgcaggccgtggagcgcacccctcactatcca
gaaagccataatttgaaagggctggtttgtgaggcacgatatgattatctgtctgctgcc
gcttcttataggctagctcgatgcagagccgctgactctttctcctgtgtttcaaaatct
caaatcagagatatatcaattaatttggccagatctcttagtaaggctggaaattttcta
gatgccgcacaggaatgtgaaaacttgaaaatagaaggattgcttgatgcggaaggtcta
cacatatatgctttatccttgtggaaacttggtcaaagtaacttggccctctctgtggtc
aaaaatcttgctgctagtgtttctagtatggagcacatttatgcggctgcctctgttagt
tttatttgtcgattgctgtattccatttctggcctagattcagcaattaatagtattctg
aaaatgccaaaggaactgtttcagagttcaagaatcagttttatagtgtctgccattcat
gctctcgaccgaagtaatcgactcgagtctgtcgttgcaagcagccgttactacctcaaa
tctcctgaagatataagtggaatgcactttctaattgcacttggtaaattagtaaaaaat
gggtcgggatcttctcttgggtttaatagtggagtggctcacctcagaaaagctcttcac
atgtaccctaatagtggtctgttaaggaacctgcttggttatctcttgctgtctggggaa
gaatggaatgattcgcatcttgcaactaggtgctgcttcggagatgtttctaatggtcta
gtgaaaggtttgaaatcaacatatgaaatccttggtgccggatctgttgcttgctatgcg
ctaagcactaggaatccgaagttttcctttccaacgtgctcatatcaatgtctgaatcct
gaagctaccgagcagctgcagaaatgcttacgtcgagaaccatggaaccagagtgtgagg
tatttacttatcctcaatttactccagaaagcacgagaagagagatttccccataacata
tgtatcatgcttgagcggctcatttgtgtggctctttccgatgaatgttattctcagata
gacgtgtcttatcaatatcaaaagttccaacttctcctttgtgcttctgagctcagtttg
caaggtggaaatcaaaatggttgtgtcaaccatgccaaaaatgcttcatcaatcacactt
cccgacggttatctcttttttgcacacttgctattatgccgtgcttatgcatcagatggt
gatcttaccaaccttcagaaagagtatataaggtgtttggagctgaagacagattgctat
gttggttggatttatctaaaaattattgaatcgcaatatggcttgcaaaatgatttaaat
ctctcagagttgaacttcaatgggtgcttgatggaagggaaggatccaccgaacatgtgg
atggctgtatttcatctagtgcaaggtttgatttgtgtgtggaagcaggatttcctttct
gctgaagactttcttagacgagcctgttcattggcaagcgctgagagctgcctccagcta
tgtcatggtgctacctgtttggagcttgccagacagtggtgtgattcacaattattgttg
cttgcaattagaagtctgaggagagctcgagaagcttcggcaacccctctaccgtttatc
tctgcattattggctcaagcagaaggaagccttggttccaaagaaaaatgggagaatagc
ctgcgtcacgaatggtttacttggccaccagaaatgaggcctgctgagcttttcttccaa
atgcatttgcttgcaagacaatcaagagcggggccggactcttccaatgtggagtgctgt
cagagtccacagagatgggttcttagggccattcatactaatccttcttgtgtcagatat
tggaaggtcttgcagaagctagatggataa
DBGET
integrated database retrieval system
