Morus notabilis: 21407727
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Entry
21407727 CDS
T07292
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21407727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21407727
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
21407727
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
21407727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
21407727
NCBI-ProteinID:
XP_010090344
UniProt:
W9QKH6
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MERGMRGTQLSLNQTQKVRLQRALEQLESLSSKVNSNASVTVADSIPVNYEDGVLKGHGT
SELNGEVVATVCGVVERVNKLVYVRALRARYKPEVGDIIVGRVVVVAPKRWRIEINYSQD
AVLMLSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKL
KRGQMLTIPPYLVKRRKQHFHHLEQFGIDLILGCNGFIWVGEHVEATDDMLEEQVNKTEQ
QITKSDRNSASLEEQEQSSIPLETRQSLCRTANAVRVLSTLGFIVTIEVILETVNLSSSL
NLDVHEMLGSEFCVLVAEKEAERRTLNKKKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagagagggatgagagggacacagctttccttgaaccagacccagaaggttcggtta
cagagagctctcgaacagctcgaatctctgtcttccaaagtcaattccaatgcctccgta
acagtcgctgattccatccccgtcaactacgaagatggcgtcctcaaaggacacggaacc
tcagagctcaacggcgaagttgtcgcgacggtttgcggcgtcgtcgagcgagtgaacaag
ctggtctacgtccgtgctttgcgcgccaggtacaagccagaggtcggagatatcatagtt
gggcgtgtcgttgtggttgctcccaagcgttggagaatagagataaattatagccaggat
gcagttttgatgctttcttcaatgaacttacctgatggtatccagaggcgccgaactgct
ctagatgaactcaacatgcgcagcatttttgaagagaatgatgttatttgcgctgaagtt
cgcggctttcaacatgatggtttacatctccaagcaagaagccaaaagtatggaaagctt
aaaaggggtcaaatgctcacaatccctccttatctagtgaagagacggaagcaacatttc
catcatttagaacagtttgggatcgatttgatacttggctgtaatggattcatctgggtt
ggtgaacatgtcgaagccacagatgatatgttggaagaacaagtgaacaagactgaacaa
caaatcaccaaatctgatagaaattcggctagtctggaagaacaagaacagagttccatc
ccattagaaacaagacagagcctatgcagaacggcaaatgcagttcgcgtgttgtctact
ttgggcttcattgttactatagaagtgatactagagacggtaaacttgagtagttctttg
aatcttgacgttcatgaaatgcttggttcagagttttgtgttttggttgctgagaaagag
gctgaacggagaaccttgaacaaaaagaagagatga
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