Morus notabilis: 21407776
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Entry
21407776 CDS
T07292
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mnt
Morus notabilis
Pathway
mnt03022
Basal transcription factors
mnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
21407776
09124 Replication and repair
03420 Nucleotide excision repair
21407776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21407776
03036 Chromosome and associated proteins [BR:
mnt03036
]
21407776
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21407776
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
21407776
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
21407776
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
21407776
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
21407776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
NAMPT_N
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
21407776
NCBI-ProteinID:
XP_010090393
UniProt:
W9QVL7
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MKFQIEDVTVYFPYDHIYPEQYAYMLELKRSLDAKGHSLLEMPTGTGKTIALLSLITSYS
LSKPQSPLKLIYCTRTVHEMEKTLAELKLLHDYQLKQLGPGAGILALGLSSRKNLCVNPR
VVTAENRDSVDAACRKLTASWVRALAAEDPDIPTCEFFESYEKAGSAAVLPPGVYTLQDL
RAFGKQKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
NVCIEALSVSVRRQTLEGARRNLNRMRQEIDRFKATDAGRLRAEYNRLVDGLAQRGNLPI
SNTWLANPALPDDILKEAVPGNIRRAEHFLHVLRRLVQYLEGRLETENVEKEGPVNFVAS
INTHAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHVQTICDFATLVGTYARGFSIIIEP
FDERMPHVPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS
FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSVVPDGIVCFFV
SYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF
LRKMAQPYDKAGGSGRKTLLSQEDLEKMGERIVDEMLY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccaaatagaggacgtgacagtgtactttccttacgaccacatatacccagag
cagtacgcttacatgctcgaactcaaacgatccctggacgccaagggccactccctcctc
gagatgcccaccggcaccggcaagaccatcgccctcctctctctcatcaccagctactct
ctctccaaaccccaatcccctctcaaactcatctactgcacccgcaccgtccacgagatg
gagaagaccctcgccgagctcaagctcctccatgactaccagctcaagcagctcggcccc
ggcgccgggatcctcgctctcggcctctcctcccgcaagaatctctgcgtcaacccccgc
gtcgtcaccgccgagaatcgcgactccgtcgacgccgcttgccggaagctcaccgccagt
tgggtccgcgccttggccgctgaggatcccgatattccgacgtgcgagttctttgagagt
tatgagaaggccggctcagccgccgtcttgccccccggggtatatactttgcaggatttg
agggcgtttgggaaacagaaaggctggtgtccctacttcttggcgcggcatatggtgcaa
tttgcgaatgtggttgtttatagttatcagtatctgcttgatccgaaagtggctgggatt
atctccaaggaaatgcagaaggaatccgtcgtggtgtttgatgaggctcacaacatagac
aatgtgtgcattgaagcgcttagtgttagcgtgaggaggcagacacttgaaggcgccaga
aggaatctgaataggatgcgtcaggagattgacaggttcaaggccactgatgctgggagg
ctgcgtgcagagtacaaccgtctcgttgatggtttggctcaaagaggaaatcttcccatc
tcaaatacttggcttgcaaaccctgccttgcctgatgatattctaaaggaggctgtgcct
ggaaatattcgcagagcagagcatttcctgcatgttttgcgtagactggttcagtatctg
gaagggcgtttggagaccgagaatgttgagaaagagggccctgttaactttgttgcctct
atcaatacacatgctggaattgaccaaaaaacactaaagttttgttatgatcgtctgcac
tcactgatgttgacactagaaattactgatacggatgagttcttacacgtccaaacaata
tgcgactttgcaacacttgtggggacgtatgcacgtggtttttctattataattgaacct
tttgatgagagaatgccccatgttcctgaccctgttttgcagcttagctgccacgacgct
tctcttgcaataaagcctgtatttgagcgatttcaatctgtagtgatcacatctggaacc
cttagccctattgatctctacccccgtcttctcaactttaatccagttgtcagtagaagt
tttacaatgtccttgacaagagattgcatatgcccaatggttcttacccgaggaagtgat
cagcttccagttagtaccaaatttgatatgagaagtgacctgggtgttgtgaggaactat
gggaggctcttgctggagatggtatctgttgttccagatgggattgtatgcttttttgtt
agttactcttatatggatggaatagtcaatagttggaatgaaactggcattttaaaggaa
ataatgcaacataagcttgtcttcattgagacacaagacgtggtagaaactacattggct
cttgataactatcgcaaggcttgtgactgtgggagaggtgctgtcttcttttctgttgcg
aggggaaaggtagccgagggaatagactttgatcgacactatggacgactggtgattatg
tttggtgttcctttccaatatacactaagcaagattttgcttgcacggttggaatattta
agggatacttttcaaataaaggaaggggattttttgacttttgatgctttgaggcaagct
gctcaatgcgtgggacgagttatccggtcaaaggctgattatggtatgatgatttttgct
gacaaaaggtatagccgtcatgataagcgctctaaattgcctggatggatactctcgcac
ttacgtgatgctcacctgaacttgagcacggacatggctcttcatatagcacgagagttc
ctcagaaaaatggctcagccatatgataaggctggtggcagcggtaggaaaaccctgctg
tcgcaagaagacttggaaaagatgggtgagcggattgtcgacgagatgttatattaa
DBGET
integrated database retrieval system
