Morus notabilis: 21407857
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Entry
21407857 CDS
T07292
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21407857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21407857
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21407857
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
21407857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
21407857
NCBI-ProteinID:
XP_024023495
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFESDLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKTRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVEA
LEDLVTIGPPGLVKGAPSLGLKTSLAASATQMPVAATSIHQQSSSVQEPVEDTASPDSIP
ETVPITPPSKSSVLGSSTATTPVASNATSAPVNIPSHNFPAVPTASSILSGSNSVRVTES
TRATNSLSPGNLSPSVKEEELGSFPSRRSSPSFTDAGLVRGIGRGGISSQLSSSAPLSSN
NVVPGSSALGVVPSTSDIAKRNILGVEERVGSSGLVQSLPSPLSNRLILPQAAKSNNGTG
SLDSGNVSEATALAGRVLSPTMVSGMPWRPGSEAFRGRTEVEPDQREKFLQRLQQVQHNN
LLGHKQFSAQQQNPLLQQFNSQNASVSQAGLGLGVQTSGLGTVSSSTLQQQTSSVHQLST
HPALVSNGAKESEIGHAKVDEQQQQNLPDDSAADHTTTSGLGKNPMSEDDLKAPYAIDSP
AGVSGSLTELAQVPRDTDLSPGQPLQANQSSGSLGVIGRRSVSDLGAIGDNVTVSTVNSG
GMHDQLHNLQMLDAAYYKLPQPKDSERTRNYTPRHPAMTPPSYPQVQAPIVNNPAFWERL
GLENYSTDTLFFSFYHQQNTYPQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQ
GTYVYFDFHVANDDLGVGQNQGWCQRIKNEFTFEYNYLEDELIV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtagaaagctacagggtgagattgacagagttttgaagaaggttcaagag
ggagtcgatgtcttcgacagcatctggaacaaggtctacgatacagagaatgcgaatcag
aaggagaagttcgagtccgacttgaagaaggagatcaagaagctccagcgataccgcgac
cagatcaagacttggattcaatccagcgaaatcaaggacaagaaggttagtgcctcttat
gagcaggccctggtcgatgctcgcaagcttattgagcgtgagatggaaaggtttaaaata
tgtgaaaaggagactaaaacaaaggcattttctaaagaaggtttgggccaacaaccaaaa
actgatccaaaagagaaggctaaatcagagacaagggattggttgaacaatgtggttggg
gagttggaatctcagattgacaactttgaagctgagctcgaggggttatccgttaagaaa
ggaaagacaagaccgcctagactgactcatttagagacatcgattactcgacataaggct
catataatgaagttagaattgattttgaggctattggataatgatgaattgagtcctgag
caggtcaatgatgttaaagacttcttggatgactatgtcgaacgtaaccaggaggatttt
gatgagtttagtgacgttgatgagctttacagttcattaccattggacaaggtagaggct
cttgaagatcttgttacaattggacctcctggtcttgtcaagggtgcaccaagtcttggc
ttgaagacttctttagcagcatcagcaactcaaatgcccgttgcagcaacatcaattcac
caacagagtagttctgtccaagaaccagttgaagacacagcttccccggacagtattcca
gagactgttcctataactccaccttctaaaagtagtgtactgggttcttcaactgcaact
actccagttgcaagtaatgcaacttctgcacccgtaaatattccatctcataatttccct
gcggtacctactgcttcctccatcctgtcaggttcaaattctgtccgcgtcactgagagc
accagagccactaattctttatctcctggaaatctttctccttcggtgaaggaagaagaa
ttaggaagctttcccagtcgtagatcatctccatctttcacagatgctggacttgtaaga
ggcattggtagaggcggaatctcgagtcaactgtcatctagtgccccccttagttccaac
aatgtagtacctggcagtagtgcccttggcgttgtcccatcaacgtctgacattgcaaag
agaaacattttgggagtcgaagagagagttggcagtagcggcttggtgcagtcacttccc
tcgcctctaagtaatagattgatcttgcctcaagctgctaagagcaacaatggaactggt
tcacttgattctggtaatgttagtgaggctactgctttagctggacgagtgttatcacct
actatggtctcgggtatgccatggagaccaggaagtgaagcgtttcgtggaagaactgaa
gtagaacctgatcagagggagaaatttttgcagcggctacaacaagtgcagcacaataac
cttcttggtcataagcagttttctgcgcaacagcaaaatccactattgcaacagtttaat
tctcaaaatgcttctgtctctcaagctggtcttggacttggagtccagacttcaggtctg
ggtaccgtttcatcttccaccttgcaacagcagacaagttctgtccatcaactgtctact
catccagcattagtttcaaatggggcaaaagaatctgaaattggtcatgcaaaagttgat
gagcagcagcaacaaaatttaccagatgattcggctgctgaccatacaactacttctggg
ctcggaaagaaccccatgagtgaggatgacttgaaagctccatatgcaattgattctcca
gctggagtttcaggctcgttaacagagctggctcaagtgccaagagatactgatctctcc
cccgggcaacctttacaggccaatcaatcttctggcagcctcggtgttattggtcgaaga
agtgtttctgacctaggtgccattggtgacaatgttacggtgtcaactgtaaactccggg
ggaatgcatgaccaattgcacaatttgcagatgctagatgctgcttattacaagctccca
caacccaaagactccgaacgcacaaggaactatactccgaggcatcctgcaatgactcct
cctagctacccgcaagtacaggcaccaattgttaacaatccagcattttgggagcgacta
ggtcttgaaaattacagcaccgacacccttttcttttccttttatcatcagcagaacact
tatccacaatatttggccgccaaagagttgaaaaagcagtcttggagataccacagaaaa
tataacacatggtttcagcgacacgaggagccgaaagtcgccaccgatgaatatgaacaa
gggacttacgtctactttgatttccatgtcgccaatgacgatctaggagttgggcaaaac
caaggatggtgtcagcggatcaagaacgagtttacattcgagtataactatcttgaagat
gagcttattgtatag
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