Morus notabilis: 21408130
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Entry
21408130 CDS
T07292
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21408130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21408130
03041 Spliceosome [BR:
mnt03041
]
21408130
03036 Chromosome and associated proteins [BR:
mnt03036
]
21408130
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
21408130
Spliceosome [BR:
mnt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
21408130
Complex B
21408130
Complex C
U2 SnRNP specific factors
21408130
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
21408130
TFTC complex
21408130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
21408130
NCBI-ProteinID:
XP_010096680
UniProt:
W9RQV9
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MYLYSLTLQRPTGIISAINGNFSGGKTQEIVVARGKVLDLLRPDENGKIQTVLSVEIFGV
IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRACMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI
FAAIELDYSEADQDSTGLAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRVDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDIFKVTLEHDNDRVTELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHSLYQFKAI
GDDDDIESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVLNLFEEETSQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDIACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSTPESLLFLEVQASIGGEDGADHPASLFL
NAGLRTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGEALRVFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVIIEGDQGAFPAEEREAAKKECFEASGMGENGNGNMEMENGGEDEDRD
DPLSDEHYGYPKAESDRWVSCIRVLDPKTSSTTCLLELQDNEAAFSICTVNFHDKEYGTL
LAVGTAKGLQFFPKRSLTAGFIHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGI
GPVLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIFVGDIQESFHYCKYRRDENQLYI
FADDCVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLN
GAPNKVEEIVQFHVGDVATCLQKASLIPGGGECMIYGTVMGSLGALLAFTSRDDVDFFSH
LEMHMRQEHPPLCGRDHMGYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPGE
ILKKLEEIRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctcactctacagcgaccgacgggaataatctccgccatcaacggc
aatttctccggcggaaagactcaggagatcgtcgtcgccagaggcaaggttctcgatctt
cttcggcccgacgaaaatggtaagatccagactgttctctccgtcgaaattttcggcgta
atcaggtctttagctcagtttcggctcactggtgctcaaaaggattacattgtcgtcggg
tccgattcgggtcgaattgtaattctcgagtataacaaggaaaagaatgtgttcgataaa
attcaccaagaaacttttggaaaatcggggtgtcggaggatagtaccggggcagtattta
gccattgatcccaagggtagggcttgtatgattggagcttgcgagaagcagaaacttgtt
tatgttttgaatagggatacagctgctaggttgactatttcgtcccccttggaagcacac
aagtcgcacacgatagtttattccatctgtggggttgattgtggttttgataacccgata
tttgccgcgatcgagttggattactcggaggcggatcaggactcgactggtctggcggcc
agtgaggcgcagaagcatttgaccttttacgagcttgaccttgggcttaaccatgtgtcg
aggaagtggtcagagcaggtcgataatggtgccaatatgttggtcactgttcctggaggc
ggtgacggaccgagcggtgtgttggtgtgtgcagagaatttcgtgatttataagaatcag
ggacacccagatgttcgagctgtgattcctaggcgtgttgatttacctgctgagcgtggg
gttctgatagtttcggcagctatgcacaagcagaaatcgatgttcttttttcttttgcag
accgagtatggagatatatttaaagttactttagagcatgacaatgaccgtgttacggaa
ttgaaaatcaagtactttgatacaattcccgttacatcttctatgtgtgttctgaagtcc
ggttttctatttgctgcatctgaatttgggaatcactcattgtatcagttcaaggctata
ggggatgatgatgatatagagtcttcctctgctacgttgatggaaactgaagaaggtttc
cagcctgtgtttttccaacctaggcgacttaagaacctcgtaaggattgatcaggttgag
agtttgatgccaattatggacatgaaagtccttaatctctttgaggaagaaacatctcaa
atatttacgctctgcggacggggtcctcggtcttctctcaggatattaagaccaggtttg
gcaatcagcgagatggccgtgtcagaacttcctggtgtaccaagtgcagtatggactgtg
aaaaagaatatcaatgatgagtttgatgcatacattgttgtgtcatttgcaaatgctact
ctcgtgctttcaattggtgagacagttgaagaagttaatgatagtgggtttcttgataca
accccttcacttgccgtttctttgataggagacgattctcttatgcaagttcacccaaat
ggcattaggcatatcagggaagatggacgcatcaatgagtggagaactcctgggaaaaga
acgattgttaaagttggctctaatagacttcaagtagttattgctctgagtggaggagag
cttatatattttgaggttgatatgactggtcaactaatggaggtggagaaacatgagatg
tctggagatattgcttgcttggatattgccccagtacccgaagggagacagagatctcgt
ttcttggctgttggttcatatgacaacacaattcgtatcttgtcactggatcctgatgac
tgtatgcagattctgagcgtgcaaagtgtttcttccactccagaatctcttctttttctc
gaagttcaggcatcaattggtggggaggatggtgctgatcatcctgctagccttttcctt
aatgctggtttacgaactggggttttgttcagaactgtggtggatatggtgacaggtcaa
ctttctgattcccgatctcgcttcttgggactgagagctccaaagctgttttccatcatt
gtgagaggaaagcgtgcaatgctttgtttgtcgagtcggccttggcttggctacattcac
caaggacattttcttttaacacccctctcctatgaaacccttgaatatgctgcctcattt
tcatctgatcagtgtgcagaaggtgtagttgctgttgctggtgaagctttaagggttttt
actattgaaaggttgggagaaacgttcaacgaaactgtcattccactaaggtacactcca
agaaagtttgtacttcaacccaagcggaagttattggtaattattgagggtgatcaggga
gctttcccagcagaagagcgtgaagctgcaaaaaaggagtgctttgaggcctctggaatg
ggagaaaacggaaatggtaacatggaaatggagaatggtggtgaggatgaggacagggac
gatcccctatctgatgagcattatggttatcccaaggccgagtctgacagatgggtttct
tgcatcagagttcttgacccaaagacttcaagtaccacttgccttttggagcttcaggat
aatgaagctgcattcagtatatgtactgtgaattttcatgataaggagtatggcactctt
ttagcagttggtacagcgaagggactgcagttttttccgaagagaagtttaactgcagga
ttcattcacatatacaggtttctagaggatggaaaatcccttgaacttctgcacaaaaca
caagtggaaggtgttcctcttgctttgtgccaatttcaggggagattacttgctggaata
ggaccggtgctcagattatatgatcttgggaaaaagagattgcttaggaaatgtgagaat
aagctcttccccaacacaatcgtatcaattcaaacatatcgtgatcgaattttcgttggt
gatattcaggagtcattccattattgcaagtacaggcgagatgagaatcagctgtacata
tttgccgatgattgtgtcccaagatggctcactgcatcgtatcacgtggattttgacaca
atggcaggtgcagacaagtttggtaacatctattttgtgcgattaccacaggatgtttca
gacgagatagaagaagatccaactggtgggaggataaagtgggagcagggaaagttgaat
ggagctcccaacaaggtagaggagatagtgcagttccatgttggcgatgtggccacttgc
ttgcagaaggcttctctgattccaggtggtggggagtgcatgatttatgggacagtgatg
ggcagtttgggggcactgcttgcattcacatcccgtgacgatgttgacttcttttctcac
ttggagatgcatatgaggcaggagcatccacccttatgtggaagagatcacatgggttat
agatctgcttattttccagtcaaggatgtaattgacggagatctttgcgagcaattccca
acattgcccctggatttgcagagaaaaattgcagatgagttggatagaacgcctggggag
attcttaaaaaacttgaagaaatccggaacaagattatctga
DBGET
integrated database retrieval system
