Morus notabilis: 21408528
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Entry
21408528 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21408528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21408528
03012 Translation factors [BR:
mnt03012
]
21408528
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21408528
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21408528
Translation factors [BR:
mnt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
21408528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
nSTAND3
AAA_22
NACHT
AAA_19
Dicer_dimer
ATPase
AAA_11
T2SSE
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
21408528
NCBI-ProteinID:
XP_024021577
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPSPSLLLLLPLLLPFPSFLPKILTLNTKPVMKDRPPSSYGAVYVPPHHRLRSVITCQNY
TSSASFDANPKNPITVAGFPPPQQQQEDRDRFPRQNSPYISAYDDAITEEGSDRDFDLSS
HPGAGPSDNIEQWKRKLTMLSRDKDKQELISREKKDRLDFDQIAILASRMGLYSHLYAKV
VVVSKVPLPNYRFDLDDRRPQREVTLPLGLLRRVEAHVSEFSSQKSRTNQSFSDVSFSRS
SSICSLATDDGLFEAPEPLASTKVVMDRVHWRRSMQLRDQQRSWQESSGGQEMLEFRRSL
PAYKEKDAVLSAISQNQVVIISGETGCGKTTQIPQFILESEIESLRGAGCSIICTQPRRI
SAMSVSERVAAERGENLGESVGYKVRLEGVKGRDTHLLFCTTGILLRRLLVDRSLKGVSH
VIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDAELFASYFGSSRVIHIPGFT
YPVRTHFLEDILEMTSYKLTPYNQIDDYGQERMWKMSKQAPRKRKSQIACVVEDALKAAD
LKDYSPQTWESLSCWNPDSIGFNFIENLLCYICENERPGAILVFMTGWDDISSLKEKLQA
HPILGDSTQFLLLACHGSMASSEQRLIFDEPKDGVRKIVLATNIAETSITINDVVFVLDC
GKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECYHLYPRCVYDAFVEYQLP
EILRTPLQSLCLQIKSLKLGSISEFLSRALQSPELLAVQNAIEYLKLIAALDENENLTVL
GRYITMLPVEPKLGKMLLLGAILNCLDPVLTIVSGLSVRDPFLTPLDKKDLAEAAKSQFS
RDYSDHLAIIRAYEGWKKAERDYAGYDYCWKNFLSAQSMKAIDALRKEFFSLLRDTGLVD
ADPTSYNAWGYDEHLIRAVICYGLYPGVCSIVNNEKSFSLKTMEDGQVLLYSNSVNSREA
KIPYPWLVFNEKIKVNSVFLRDSTALIDSALLLFGGSILKGDTHGHLKMLGGYLEFFMKP
AVADMYIGLRRELDDLIQDKLLNPRLDINAYRQLLSAVRLLISEDQCDGRFVFGRQVHLQ
SSSETFVAATQPALVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQFFATVE
FNGMQIMGQPCSNKKSAEKDAAAEALQWLMGESRTGHEYINHMSMRLKKSKKDHN
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaccttctcttctccttcttcttcctcttcttcttccctttccctctttcctc
cccaaaatcctaaccctaaacacgaaacccgtgatgaaggaccggcctccttcctcatac
ggcgccgtttacgtccctccccaccaccgcctccgttccgtcattacctgccagaactac
acctcatcagcttcctttgacgctaatcccaagaatcctataaccgttgccggttttccg
ccgccgcagcagcagcaggaggaccgggaccgcttcccgaggcagaactcgccctacatt
tccgcctacgacgatgccatcaccgaggaaggttctgatcgcgacttcgacttgtcttcg
catccgggtgctggtccctctgataacatcgagcagtggaaaaggaaattaacaatgctt
tcacgggacaaggataagcaagagttgatttccagggagaaaaaggatagacttgacttt
gatcagatagccattttggcgagcagaatggggttatatagccatctgtatgcaaaagtt
gttgttgtcagtaaggtcccacttccaaactatagattcgatctggatgataggcgccca
cagagggaggtgaccttgcctcttggcttgctaaggagggttgaggcgcatgtttctgag
ttctcatctcaaaagtctaggactaaccaaagcttttcggatgtttccttttcaagatca
agtagtatttgtagtcttgccactgatgatggactttttgaggcacctgagccactggct
tccactaaggtggtgatggatagagttcattggcgtagaagcatgcaattgagggatcaa
caacgatcttggcaggaatcttctggaggccaggaaatgctggagtttcgtagaagtctt
cctgcttataaggagaaggatgcagtgttatctgccatttcacagaatcaggtcgttatc
atctcaggtgaaactggttgtggcaagaccacacaaattccacaattcattttggaatct
gagatagagtctcttcgtggggctggttgtagtattatatgtacacagcctagaaggata
tctgctatgtctgtatctgaaagagttgctgctgagagaggcgaaaatttgggtgaatcg
gttggatataaggttcgtttagaaggtgtaaaaggaagggatacccaccttctcttttgt
accactggcatcttgttaagaagattgctggttgatagaagtttgaaaggtgtaagccat
gttattgtggatgagatccacgagcgtggaatgaatgaagattttctgcttattgtgctt
aaggatctgctgcctcggcgaccggaactaagactgattttgatgagtgctaccctagat
gcggagctctttgcatcgtactttggtagttctcgggttattcacattccaggttttaca
tacccagttcgaactcattttctggaggatattcttgaaatgacgagttacaaattaacc
ccttacaatcaaattgatgattatggtcaagaaagaatgtggaagatgagcaagcaagca
cctagaaagaggaaaagccaaattgcttgtgttgttgaggatgcgctcaaggctgctgat
ttaaaagattatagcccccagacttgggaatctctatcatgttggaatcctgattctatc
ggttttaatttcatcgagaatcttttgtgttatatttgtgagaatgaaaggccaggcgca
attctagtttttatgactgggtgggatgacataagttctctgaaggaaaagctccaagct
catcccatattaggtgattcaacccaatttttgttgctagcatgccatggttctatggcc
agttctgagcagaggttaatatttgacgagcctaaagatggggtgaggaaaattgtacta
gcgactaacattgctgagacaagtatcacaattaatgatgtcgtttttgtactcgactgt
gggaaggccaaagagacatcatacgatgcactgaacaatactccttgtttgcttccttcc
tggatatccaaggtttctgctcagcaaagaagaggaagagctggtcgtgttcaacctgga
gaatgttaccatctttaccctagatgtgtgtatgatgcttttgtggagtatcaattgcct
gaaattttgaggacgcctttgcagtctctttgtctccaaataaaaagtttaaaacttgga
agtatttctgagttcctatccagggctttacagtcaccagagttattagcggtgcaaaat
gccattgaatatttaaaactgattgcggcattggatgagaatgaaaatctaactgtttta
ggacgatatataacaatgcttcctgtggagccaaaactcggaaagatgctcttattaggt
gccatattaaattgcctggatccagtactgactattgtttctgggctcagtgtcagagat
ccttttttaacaccattggacaagaaggatcttgcagaagctgcaaaatctcagttttct
agagactacagtgatcaccttgccattattagagcttatgagggatggaaaaaggctgaa
agagactatgctggttatgattactgctggaaaaatttcctttcagcacaatcaatgaaa
gcaattgatgctcttaggaaggagttcttctctttgcttagggatactggtctggttgat
gccgatcccaccagctataatgcatggggctatgacgagcatcttatacgagcagttatt
tgctatggtctatatcctggagtttgctccattgtgaataatgagaagtcattttcacta
aaaactatggaggatggccaggtgcttttatactcgaactcagttaattctcgggaagct
aaaataccatacccatggctagtttttaatgagaagataaaagtgaactctgttttccta
cgggattcaacagctctcatcgattcagcacttcttctgtttggtggaagcatattgaaa
ggggatacacatggacacttgaaaatgttgggagggtatttggaattcttcatgaaacct
gctgtagcggatatgtacataggcttaaggagggaacttgacgatctaattcaggacaaa
cttctgaatcccaggttggacataaatgcctatcgtcagctcctatctgcagtacggttg
ctgatatctgaggatcagtgtgatggaagatttgtatttggccgccaggtccaccttcag
tcttcttcagagaccttcgttgctgccacacagccagctttggtttcaaggactgaaagc
ggacctggtggtgataattctaaaagtcagctccaaacactgctcacccgagcaggatat
gctgcacccacatacaaaactaagcaactcaagaacaaccagttcttcgccacagtggag
ttcaacggaatgcaaatcatggggcaaccatgtagcaacaaaaagagtgctgaaaaagac
gcggcagctgaggctcttcagtggctgatgggtgaaagccgtacaggccacgagtacata
aatcacatgtctatgaggctaaagaaaagcaagaaagatcataactaa
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integrated database retrieval system
