Morus notabilis: 21409554
Help
Entry
21409554 CDS
T07292
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mnt
Morus notabilis
Pathway
mnt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
21409554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnt03021
]
21409554
03036 Chromosome and associated proteins [BR:
mnt03036
]
21409554
Transcription machinery [BR:
mnt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
21409554
Chromosome and associated proteins [BR:
mnt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
21409554
PBAF complex
21409554
GBAF(ncBAF) complex
21409554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
21409554
NCBI-ProteinID:
XP_010096186
UniProt:
W9R169
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MEEKRRDAGTSTSASGDSPATEPTSSRRRAGGQKRKSGNLGSSGSSSAPSKRATREKSSL
SHPPIHNGPLTRARQAPSSLSSSLASADGAPAASASGGAKPAAEQARVPGVLGGETVAAA
SVAEELRKESELEALESGLEAKFQAIRSRSNSAHVVPSHCGWFSWTKIHPIEERTLPSFF
NGKSELRTADTYLEIRNWIMKKFHSNPSTQIELKDLSELEVGDLDARQEVLEFLDHWGLI
NFHPFPPTSSAVGGADGDGDGTAKKGSLADKLYHFEIPQSSMPVIPKNNVAAPAVPSGLF
PESAIAEELVRVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSTDFILM
EPGEGAGLSGGKWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFVQMPIEDTF
LDYDDNMDSTSKENADPASTEKDQSVPKDAGEATKGETAASENQSPTSPMETSKEDIKDV
KASQDTSKPVEANEVKASQENSKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPLTCEG
SFSFAEVGNPAMALAAFLARLVGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLEDPPN
DNKEPAGLLSVDKVANGETQTDEIPCDKKEDSSLEEKTCLSAPEGESQEKPHAAKEQEAV
VASEEGDSVNLKKRSTSKIIKDQPPSTLGGSGELKAEGELPPSLVKESEGKSGQLPESTE
TLNDVEMSEPPPSEKNEPQQNVSLNFRSDSTHSAEDLKNVDAVSDSLPLEKNDKHGKIVN
SDGKPPSNAARDVDMVPHSQESEKIEPPQPVLAKAIVENTAIEEPTKDGDKEKHDALETK
EHKIDKIKRAAASAISAAAVKAKLLANQEEDQIRRLSALLIEKQLQKMETKLAFFNEMEN
VVMRVREQMDRSRQRLYHERAQIIAARLGLPASSSRVMPSSLPGNRIGVNIAGSVTRPPL
SMVSQRPPMSRPMGSVAPSPSIPLPTLAGSSIQPPCQDKLSSVGTK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgccgcgacgccggaacctcaacgtcggcgagcggagattctccggcg
accgagccaacttcgtcgcggcgacgtgccggcggccagaagcggaaatccggaaacctc
ggctcctctggctcttcgtcggcgccttcaaagcgcgccactcgcgagaagtcctctctc
tctcaccctccgatccacaacggcccgttgaccagggctcgccaggctccatccagcctc
tcctcgagcttagcttccgccgatggcgcccccgccgcgtcggcatccggcggcgccaag
ccagctgcggagcaagccagggttcccggcgtcttgggcggagagaccgtggcggctgct
tctgtagcggaggaattgagaaaggagagcgaattggaagccttggagtcggggcttgag
gccaagttccaggccattagatctcgaagtaacagcgctcatgtggttcctagtcattgc
ggatggttttcatggacaaaaattcaccccattgaggagcgcacattgccatctttcttt
aatgggaagtctgagttgcgtactgccgacacatacttggagattcgtaattggattatg
aagaaattccattcaaatccaagcacacagattgagttgaaagacttgtcagaacttgag
gttggagacttggatgctagacaagaggtactggagtttttggaccattggggtttgatt
aatttccacccatttccaccaacaagttctgcggtgggcggtgctgatggtgatggtgat
ggcacggcaaaaaagggttctttggctgataagttgtatcacttcgaaataccacaatcg
tctatgcctgtcattcccaagaataatgtagctgctccagctgttccatctgggttattt
ccagaatctgcaattgctgaagagctggtgagggttgagtaccattgcaactcttgttca
gctgattgctctcgcaagcggtaccattgtcagaagcaggcagattttgatttatgtacc
gattgctttaataatgggaagttcgactctggcatgtcatctacggactttattctcatg
gagcctggtgagggtgctgggctgagtggtgggaagtggacagatcaggagaccctactt
ctccttgaagcattagagctttataaagaaaactggagtgaaattgcagaacatgttgct
acgaaaaccaaagctcaatgcatattgcactttgtccaaatgcccattgaggataccttt
ctcgattatgacgataatatggactccacttccaaagaaaatgcagacccagcttcaaca
gagaaggatcaatcagtccccaaagatgctggtgaagcaactaaaggtgagactgctgct
agtgaaaatcagtccccgacttccccaatggaaacttcaaaagaagatataaaggatgta
aaagctagtcaggacacttcaaaaccagttgaggctaatgaagtgaaagccagccaggaa
aattcaaaacgaaaggaaggcagcgaatccaaagtaggtgaggagacagaagaagactgc
acaataaaggcccttaaggaagcatttgaagccgttggttatcctctaacgtgtgaggga
tcattttcatttgcagaagtaggaaaccccgccatggctttggcagctttcctagcacgc
ttggtgggacctgaccttgcaactgcttcagctcataattctttgaaatccctatccgga
aactctccaagcattgagctagctgtgaggcactgctttcttttggaagatccaccaaat
gataataaggaaccggctggattgcttagtgttgataaagtggctaatggggagactcaa
acagatgaaatcccatgtgacaagaaagaggattctagtcttgaagaaaagacatgtttg
agtgctccagaaggtgaatcccaggagaaaccacatgctgcaaaagaacaggaggccgta
gttgcgagtgaggaaggtgattccgttaatttaaagaaacgaagcacttctaagataata
aaggatcaaccaccatctacactgggtggatcaggagaattaaaagctgagggagagctt
ccgccaagtttggtgaaggagtcagaaggaaaatcaggacagcttcctgaatccacagag
actttgaacgatgtagaaatgtctgaacctcctccctcagaaaagaatgagccccagcaa
aacgtttcattgaatttcaggagtgactctacccactctgcagaagatttaaaaaatgtt
gacgcggtgtctgattctctgcctctggagaagaacgacaagcatggtaaaattgtcaac
tcagatggaaaacccccttctaatgccgcaagagatgtagatatggtgcctcattctcag
gaatcagaaaagattgaacctccacaacctgttttggcaaaagccatcgttgaaaataca
gcaattgaagagcctactaaagatggtgacaaagagaagcacgatgctttggagacgaaa
gaacataagattgataaaataaagcgtgctgcagcctctgctatttcagcagcagcagtg
aaggcaaaactccttgcaaatcaggaagaagaccaaatccgacgactgtcagcattgttg
atagagaagcagttgcagaaaatggaaaccaagttagcctttttcaatgagatggaaaat
gttgttatgagggtgagggagcaaatggacagatcaaggcagcggctttaccatgaacgg
gcacagataattgcagccagactcggcttacccgcttcctcatctagggtgatgccttca
tcgctgcctggcaatagaattggcgtgaacattgctggctcagttacaaggcctcctcta
agcatggtttcccagaggccaccaatgtcaagacccatggggtctgtggctcctagtcct
tcaatacctttaccaacattggcaggaagctcaattcaacctccctgccaggacaaactt
tcttctgttggaacaaagtaa
DBGET
integrated database retrieval system
